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Protein Overview: RM17_SCHPO

General Information:
Name(s) found: RM17_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19075948|ref|NP_588448.1| hypothetical protein SPCC126.05c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • 54S ribosomal protein L17, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl17 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 268 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLKRNIINM QRSFSRQFHI SVRNSIQSSK PLSNSTPLKG CSVGTILIRS PILTRQPSEF  60
   61 EKSIYKYNAE LWNELSDPLP AEFYFKKGSV GEKDWQERQK TLKGKESPFE TIFGKERKEM 120
  121 ESNKLLDSAT HLQSRVTEAD TKNDERSTLR SLDKSLYLLV KKSKSSGWQF PNTPVTSSEK 180
  181 ALHLLCQDLL KNILDENSLT WLVARHPLAL LKTEQEKTFL LRARLLNGLD VPNLQNVYDW 240
  241 VWCTYDELKN KLSPSSWDSV KNILSDRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [128..268] FFAS03 2.42 Diadenosine tetraphosphate hydrolase (Ap4A hydrolase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.38338559299412 bayes_pls_golite062009
  • binding
    		•  0.881558273069274 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.495924061190848 bayes_pls_golite062009
  • RNA binding
    		•  0.44030858339937 bayes_pls_golite062009
  • protein binding
    		•  0.358912650308843 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle