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Protein Overview: UTP22_SCHPO

General Information:
Name(s) found: UTP22_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • U3 small nucleolar RNA-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=utp22 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 1097 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGLKREHES SSSQDGSKTP ETEYDSHVDS IEDIHSLASK RKKLNEKKEN LEDLTLLKTS  60
   61 AFELKLNELI REISVRGKYF RHANTFVEKI KDLIFKTPVI PETNFWSACK NLEKDKKVIV 120
  121 PLAEPLSAKD TNLRASFVPP KTVTPGIFSC SNKFFLNPDG WSYDLFLEIP ESIFTQKDYL 180
  181 NGRYFRKRAF YLTCIAKHLL ENLGNEVKLE FVAFNDDIRR PILAILPESK GFAATGKRFT 240
  241 VFLIPTVRQI FPVSKLLPHK NAIRDFMEHE ELKPTPFYNN SVLEEQNLLF YRDLVKKYSV 300
  301 NPQFLDACGL GSTWLNMRGF SSSIHSNGFG LLEWYVLMAL LMSSTGLPAG NVLNTYLTAA 360
  361 QFFKSMLQFL SSKNLTSTLF KLNADSSNLK IGNGHLPTLI DCNTGFNLLG KMKQSFFEYF 420
  421 QASCRHTLNL LDENANYNFS KIFITHVNVP ALEFDVSGCI PLEPKELEDP NFCRKTDLDS 480
  481 PYSLYLEYTW DLLQHALGDR VCQIILYSSI CTSCSINESL KTKLPKLISF GLLLNPDALL 540
  541 RLVDIGPSPD DTVGSQKFRE FWGEVSELRK FKNGSIAESV YWECSSPDER IRIPQRIIRH 600
  601 ILNRHLGNNV GDRVSFRNEK FRVYVHSKIS PNTDTYNEYV PVMEAYNEAV KSLINLSDIP 660
  661 LSIAEILPAD ESLRYSSSSV PFYESSTCAP IDVVFQFESS SKWPDELEGI QRTKIAFLLK 720
  721 IAELLEALDN VERASVGLEN TDNPTHNCCF LQVLFSNNFT FRYRLRNDRE IFFWKSLERN 780
  781 PSTKLSAQKG LYAYEHMFQF IPRHTLAIQA ICQAHRSYSM AVRLAKHWFY SHLLTDHVTD 840
  841 EVIELLVASV YINSSSWRTT SSGETSFCRM LHFLAHWDWR FDPLIINSNG KLPHDVRHQA 900
  901 TEKLESIRKQ DVAIAHNAYY IITDYDFDGN HIGYYKPSKI IANRITSLAR ASLSELLKDT 960
  961 PNYKSIFKSS LDIYHVVIDV NINKLPMYRE SNLTKYKNLQ NMSSERPGFE PITEFVKELH1020
 1021 RCFEDTISFF YNKKNPKVVT GVFNPRILAN RPYRTNIDYP FKVVDKDTVV LDADVVCEEI1080
 1081 RQVGGDLIRS IQLQLKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..676] FFAS03 2.55 Crystal structure of poly(A) polymerase in complex with 3'-dATP and magnesium chloride
    2 View Details [677..856] deduced N/A No confident structure predictions are available.
    3 View Details [857..1002] MSA 2.049975 View MSA. No confident structure predictions are available.
    4 View Details [1003..1097] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA binding
    		•  3.21555027517466 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.7166207083291 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.4031460115872 bayes_pls_golite062009
  • polynucleotide adenylyltransferase activity
    		•  0.986864608285919 bayes_pls_golite062009
  • binding
    		•  0.940725834840942 bayes_pls_golite062009
  • DNA binding
    		•  0.931982952649779 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.825883515331479 bayes_pls_golite062009
  • catalytic activity
    		•  0.718799603354138 bayes_pls_golite062009
  • transferase activity
    		•  0.245732860673913 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle