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Protein Overview: LCB4_SCHPO

General Information:
Name(s) found: LCB4_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Sphingoid long chain base kinase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lcb4 PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFGLTNNSI KAFEDQKLLH IHQSCVSYPS DTLICSIPVS AKNVDLNIPF KNILWVDKTG  60
   61 PNSVTLSYVS RSSKVATKCW VDFVENSDQF CEYLLDVAYK GIKRSRRFIV FINPHGGKGK 120
  121 AKHIWESEAE PVFSSAHSIC EVVLTRRKDH AKSIAKNLDV GSYDGILSVG GDGLFHEVIN 180
  181 GLGERDDYLE AFKLPVCMIP GGSGNAFSYN ATGQLKPALT ALEILKGRPT SFDLMTFEQK 240
  241 GKKAYSFLTA NYGIIADCDI GTENWRFMGE NRAYLGFFLR LFQKPDWKCS IEMDVVSSDR 300
  301 TEIKHMYEKS KNLAPMSESS DSDKTVSTSP ESHLLTFEIN DLSIFCAGLL PYIAPDAKMF 360
  361 PAASNDDGLI DVVIVYSKQF RKSLLSMFTQ LDNGGFYYSK HLNYYKVRSF RFTPVNTGKR 420
  421 HYFALDGESY PLEPFECRVA PKLGTTLSPV AGFQLLDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] MSA 2.098995 View MSA. No confident structure predictions are available.
    2 View Details [105..458] PSI-BLAST 46.522879 No description for 2bonA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle