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Protein Overview: AVL9_SCHPO

General Information:
Name(s) found: AVL9_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Late secretory pathway protein avl9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avl9 PE=3 SV=2 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDENGASFQV LCLATIGFHH LRGPEIEHLF PESMDFPKEW SILPFLSLPD GAHSSEKDFV  60
   61 YFTLPFPNDE GTVFGLSCTR QLNASSLKNI PSDVTRSSVQ KAVVVITTSP PFGHIKDNLD 120
  121 IVTNAYFSQG DFSNLDVLRD FFHVLTRKEQ DVHIALNINL KSFLCEWRQN ALVLLKVLLL 180
  181 GKRILVYDKS AERLGNFQYS LLSLIPCMMS HLQDVSSPSA HSLEKSLHKP ASLQTSDKRS 240
  241 LLAYTGFPLI IFGEGSMFSP YTPLQLVHVL EAKSSTSWLA GTTNTLIMLN QNKMAEVIVR 300
  301 SDTHQIEFVD PTIKNLTSLT YTDKSWMEDI ISRVESSLEM ELPGFEGSDD WIRNQFELYI 360
  361 FGMLATVKYY NFLKKQDDSI LSQYHYLPST SCISDYGETF LLEWMKTNTF RIWNNIADDD 420
  421 LFDVILPKHP CKEEHKVPIS ARIATLFSAV KITPKSRDGE DEGSKEPAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] MSA 9.03498 View MSA. No confident structure predictions are available.
    2 View Details [180..318] MSA 1.02499 View MSA. No confident structure predictions are available.
    3 View Details [319..469] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle