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Protein Overview: SPT20_SCHPO

General Information:
Name(s) found: SPT20_SCHPO [Swiss-Prot]
Description(s) found:
Found 3 descriptions.
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  • SAGA complex subunit spt20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spt20 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERNNGLGDY TYRYHGKELS LDDFQNKQGI ESSDDAFLSK IYENVSNFNV PRKLHDIEHK  60
   61 FSKEEPSLIL HIHKFHFRFE QQDGAFTYNG PVKSILQYIR MELIPPDCLE VFRNSDVKFY 120
  121 DGCLTVRIID HRQSPSADQT VQPQPGSTNQ QQQNNTNPIN NQPEDTKPNT NSPPVYHTVL 180
  181 RPTPETLWQD LCLLSESFAN SLSDEAVLTL ESNILLASEA PLFLTPAKSK AEMIQFMNQL 240
  241 ADSAPPCTRK KPQGSAQLAD EEAERLEKEN LLLLMDDQRK RDFQPTFQRL QFIENVRRKR 300
  301 AILQQRQMQM QQQQKAQQQQ SPKAQQPPAH LVQSAPVQRK TTPKIQRLPP SSIQIPPPKP 360
  361 MQKFPANAAS SESPPNATGN FLPSGPVPAN EPMLKRESVD LIKIRQLAIL FQQRASQLKA 420
  421 RGATREQITE ILNRQAIAAG TDLATVMTVA RNLHFQQLQM RQQQQQQQMK AER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] MSA 3.032988 View MSA. No confident structure predictions are available.
    2 View Details [239..331] MSA 1.028992 View MSA. No confident structure predictions are available.
    3 View Details [332..473] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle