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View Structure Prediction Details

Protein: SPAC4D7.10c
Organism: Schizosaccharomyces pombe
Length: 473 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4D7.10c.

Description E-value Query
Range
Subject
Range
gi|114688035 - gi|114688035|ref|XP_528905.2| PREDICTED: similar to family with sequence similarity 48, member A iso...
301.0 [0..27] [327..34]
gi|113429734 - gi|113429734|ref|XP_001131038.1| PREDICTED: similar to transcription factor (p38 interacting protein...
299.0 [0..27] [327..144]
gi|86822082, gi|... - gi|86822082|gb|AAI05572.1| Family with sequence similarity 48, member A [Bos taurus], gi|114052158|r...
291.0 [0..26] [334..33]
gi|109130249 - gi|109130249|ref|XP_001089593.1| PREDICTED: similar to transcription factor (p38 interacting protein...
288.0 [0..27] [327..55]
gi|94409070 - gi|94409070|ref|XP_984952.1| PREDICTED: similar to family with sequence similarity 48, member A isof...
284.0 [0..23] [366..30]
gi|73993205 - gi|73993205|ref|XP_856395.1| PREDICTED: similar to family with sequence similarity 48, member A isof...
284.0 [0..26] [334..33]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERNNGLGDY TYRYHGKELS LDDFQNKQGI ESSDDAFLSK IYENVSNFNV PRKLHDIEHK  60
   61 FSKEEPSLIL HIHKFHFRFE QQDGAFTYNG PVKSILQYIR MELIPPDCLE VFRNSDVKFY 120
  121 DGCLTVRIID HRQSPSADQT VQPQPGSTNQ QQQNNTNPIN NQPEDTKPNT NSPPVYHTVL 180
  181 RPTPETLWQD LCLLSESFAN SLSDEAVLTL ESNILLASEA PLFLTPAKSK AEMIQFMN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [239-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLADSAPPCT RKKPQGSAQL ADEEAERLEK ENLLLLMDDQ RKRDFQPTFQ RLQFIENVRR  60
   61 KRAILQQRQM QMQQQQKAQQ QQSPKAQQPP AHL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [332-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQSAPVQRKT TPKIQRLPPS SIQIPPPKPM QKFPANAASS ESPPNATGNF LPSGPVPANE  60
   61 PMLKRESVDL IKIRQLAILF QQRASQLKAR GATREQITEI LNRQAIAAGT DLATVMTVAR 120
  121 NLHFQQLQMR QQQQQQQMKA ER

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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