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Protein Overview: YDM6_SCHPO

General Information:
Name(s) found: YDM6_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19114287|ref|NP_593375.1| hypothetical protein SPAC57A7.06 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Uncharacterized protein C57A7.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC57A7.06 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 929 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGKVNTL PQPQGKHQRK GKKQLENKIL HSYEEESAGF DSEELEDNDE QGYSFGVNSE  60
   61 DDEEIDSDEA FDEEDEKRFA DWSFNASKSG KSNKDHKNLN NTKEISLNEE DDSDDSVNSD 120
  121 KLENEGSVGS SIDENELVDL DTLLDNDQPE KNESNTASTI RPPWIGNNDH ATDKENLLES 180
  181 DASSSNDSES ELTDSADNMN ESDSESEIES SDSDHDDGEN SDSKLDNLRN YIVSLNQKRK 240
  241 KDEADAESVL SSDDNDSIEE ISIKKVKYDP HETNKESEYN LIGSSEKTID ITDLLDSIPM 300
  301 NEQLKVSLKP LVSESSSISS KKLDAPLAKS IQDRLERQAA YEQTKNDLEK WKPIVADNRK 360
  361 SDQLIFPMNE TARPVPSNNG LASSFEPRTE SERKMHQALL DAGLENESAL KKQEELALNK 420
  421 LSVEEVAERT RQLRFMRELM FREERKAKRV AKIKSKTYRK IRKNRKEKEM ALIPKSEEDL 480
  481 ENERIKSEEA RALERMTQRH KNTSSWTRKM LERASHGEGT REAVNEQIRK GDELMQRIHG 540
  541 KEISEMDGED VSEFSDSDYD TNEQVSTAFE KIRNEEEPKL KGVLGMKFMR DASNRQKALV 600
  601 QDEMQAFEDE LAGVPNEDDT SQKGEDGVPG VLIGNNTGRR SFKPSEEAAK LSLPSRKNPF 660
  661 VSDSAVLKVN KPEMKEGQKK AEARKKKESP LEATEETNPW LQVPDQRTSS AKKLDKNSSK 720
  721 ADKKNHKLKM DKVASLQELV EEPKVQPDLI FEEKAFESAS EAESDVDVSV PMLKPTKGRL 780
  781 SIKQRELVAK AFAGDDVVAE FEKDKEDWVQ EDAPKEEDHS LPGWGSWGGV GVKQRKTKPK 840
  841 VKKIAGLDPS KRKDSKLKHV IINEKRNKKA AKLTADSVPF PFESREQYER SLNLPMGPEW 900
  901 TTRASHHKAV APRVVTKRGK VINPIKAPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 15.0 Heavy meromyosin subfragment
    2 View Details [326..497] FFAS03 1.17 crystal structure of the cytotoxic bacterial protein colicin B at 2.5 A resolution
    3 View Details [498..821] PSI-BLAST 7.522879 Tropomyosin
    4 View Details [822..929] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle