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Protein Overview: gi|90265250

General Information:
Name(s) found: gi|90265250 [NCBI NR]
Description(s) found:
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  • gi|90265250|emb|CAH67703.1| H0624F09.11 [Oryza sativa (indica cultivar-group)] [NCBI NR]
  • H0624F09.11 [Oryza sativa (indica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Indica Group
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKKVLLLC GDYMEDYEAM VPFQALQAYG VSVDAACPGK KAGDSCRTAV HQGIGHQTYA  60
   61 ESRGHNFALN ASFDEVNINE YDGLVIPGGR APEYLAMDEK VLDLVRKFSD AKKPIASVCH 120
  121 GQLILAAAGV VQNRKCTAYP AVKPVLVAAG AKWEEADTMD KCTVDGNLVT AVAYDAHPEF 180
  181 ISLFVKALGG SVTGSNKRIL FLCGDYMEDY EVMVPFQSLQ ALGCHVDAVC PDKGAGEKCP 240
  241 TAIHDFEGDQ TYSEKPGHDF ALTASFDNVD ASSYDALVIP GGRAPEYLAL NDKVISLVKG 300
  301 FMDKAKPVAS ICHGQQILSA AGVLQGRKCT AYPAVKLNVV LGGATWLEPN PIDRCFTDGN 360
  361 LVTGAAWPGH PEFISQLMAL LGIKVSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] PSI-BLAST 36.522879 Intracellular protease
    2 View Details [193..257] FFAS03 1.72 Hypothetical protein YhbO
    3 View Details [258..387] PSI-BLAST 3.09691 Crystal structure of E. coli carbamoyl phosphate synthetase small subunit mutant C248D complexed with uridine 5'-monophosphate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • peptidase activity
    		•  0.979854267460874 bayes_pls_golite062009
  • ligase activity
    		•  0.446163365364068 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.399144189094009 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle