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Protein Overview: DMA1_SCHPO

General Information:
Name(s) found: DMA1_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19114645|ref|NP_593733.1| hypothetical protein SPAC17G8.10c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSVEGYLK EQELAAETDS EKDDDKISIR LTNFVGPNAH SFSFDPLVRY WNRKQNNLPI  60
   61 YIGRYTERYN GGDVSAIVFR SKVVSRRHAQ IFYENNTWYI QDMGSSSGTF LNHVRLSPPS 120
  121 KTSKPYPISN NDILQLGADY RGGHEVNYRC VRARVELNNS WKIKLSPYNL NEFKRMQELV 180
  181 LCGSSESGPP ECCICLMPVL PCQALFVAPC SHSYHYKCIR PTLNESHPYF SCFICRKYHD 240
  241 LEAPVEEGDE SLNDLLRNAT VKDDASE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] PSI-BLAST 8.69897 Mycobacterium tuberculosis EmbR
    2 View Details [103..267] PSI-BLAST 8.30103 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.69791297400248 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  2.20438586677555 bayes_pls_golite062009
  • protein binding
    		•  2.14586566310919 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  1.97264874084155 bayes_pls_golite062009
  • molecular adaptor activity
    		•  1.33740973673697 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.26357595913158 bayes_pls_golite062009
  • SH3/SH2 adaptor activity
    		•  1.2323381312171 bayes_pls_golite062009
  • signal transducer activity
    		•  0.999269271132931 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.999269271132931 bayes_pls_golite062009
  • protein binding, bridging
    		•  0.83823250804321 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.748479359639348 bayes_pls_golite062009
  • kinase activity
    		•  0.662911740280035 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.493362981045534 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.456661966897198 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.452350351194157 bayes_pls_golite062009
  • protein phosphorylated amino acid binding
    		•  0.43808715710519 bayes_pls_golite062009
  • kinase regulator activity
    		•  0.262406945568467 bayes_pls_golite062009
  • transferase activity
    		•  0.169970258787201 bayes_pls_golite062009
  • phosphoprotein binding
    		•  0.16798254471727 bayes_pls_golite062009
  • protein kinase activity
    		•  0.0865488336042732 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle