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Protein Overview: ALLC_SCHPO

General Information:
Name(s) found: ALLC_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19115407|ref|NP_594495.1| hypothetical protein SPAC1F7.09c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Probable allantoicase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F7.09c PE=3 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVENVERLS PEQADAFFGQ SSVDLISRAL GGQVLGCSDD FFASCENLIN PADPIRKAGV  60
   61 FVETGAWYDG WETRRHNTAP CDWVIVKLGP SSGRVTGCEI DTTFFNGNHA PEVSVEAAFL 120
  121 PEGNPDAKTN WTPILPKLPC GPTQRHIYRF KEIPQQNFTH VRLCMYPDGG IARFRLYGNV 180
  181 VPVFPADLDA RLDLAHMYLG GLVVQCSDQH FGKKDNLLLP GRGVNMGDGW ETARSREKGH 240
  241 VDWVIVKLGA RGYIDDALID TNHFKGNYPK EVILEAIDSP DHIPGPDAQW VTILPARKLG 300
  301 PHMEHVFTNL QNNSTPMTHV RMIIIPDGGV KRLRIYGRRA AN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 130.0 Crystal structure of Allantoicase (yir029w) from Saccharomyces cerevisiae at 2.40 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • allantoicase activity
    		•  3.21785739891956 bayes_pls_golite062009
  • binding
    		•  1.56884951913654 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.718803937693854 bayes_pls_golite062009
  • DNA binding
    		•  0.547507778308479 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle