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Protein Overview: TCF23_MOUSE

General Information:
Name(s) found: TCF23_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|81906782|sp|Q9JLR5.1|TCF23_MOUSE RecName: Full=Transcription factor 23; AltName: Full=Basic helix-loop-helix transcription factor OUT; AltName: Full=Ovary, uterus and testis protein [NCBI NR]
  • gi|6906853|gb|AAF31168.1|AF142405_1 basic helix-loop-helix transcription factor OUT [Mus musculus] [NCBI NR]
  • gi|26326283|dbj|BAC26885.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|26326259|dbj|BAC26873.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|16716369|ref|NP_444315.1| transcription factor 23 [Mus musculus] [NCBI NR]
  • gi|15963442|dbj|BAB69473.1| basic helix-loop-helix transcription factor OUT [Mus musculus] [NCBI NR]
  • gi|148705372|gb|EDL37319.1| transcription factor 23 [Mus musculus] [NCBI NR]
  • gi|111600992|gb|AAI19347.1| Transcription factor 23 [Mus musculus] [NCBI NR]
  • gi|111308760|gb|AAI20610.1| Transcription factor 23 [Mus musculus] [NCBI NR]
  • Transcription factor 23 OS=Mus musculus GN=Tcf23 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-29191408 Basic helix-loop-helix transcription factor OUT [hmr_yeast5_DM3-1_pombe.fasta]
  • transcription factor 23 [HMR_022704-rand.fasta]
  • transcription factor 23 [Mus musculus]gi|6906853|gb|AAF31168.1| basic helix-loop-helix transcription factor OUT [Mus musculus]gi|15963442|dbj|BAB69473.1| basic helix-loop-helix transcription factor OUT [Mus musculus]gi|26326283|dbj|BAC26885.1| unnamed [nrdb_11152004_Chlamydomonas]
  • Basic helix-loop-helix transcription factor OUT [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Basic helix-loop-helix transcription factor OUT [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_053085) transcription factor 23 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • transcription factor 23 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Transcription factor 23 (Basic helix-loop-helix transcription factor OUT) (Ovary, uterus and testis protein) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transcription factor 23 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • basic helix-loop-helix transcription factor OUT [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR OUT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Tcf23 Transcription factor 23 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Tcf23 Basic helix-loop-helix transcription factor OUT [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Tcf23 Transcription factor 23 ENSMUSG00000006642 IPI00124641 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00124641.1|SWISS-PROT:Q9JLR5|ENSEMBL:ENSMUSP00000006818|REFSEQ:NP_444315 Tax_Id=10090 Gene_Symbol=Tcf23 Transcription factor 23 [ipi.MOUSE.fasta.20090209]
  • Transcription factor 23 OS=Mus musculus GN=Tcf23 [011711_HMR.fasta]
  • sp|Q9JLR5|TCF23_MOUSE Transcription factor 23 OS=Mus musculus GN=Tcf23 PE=1 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: muscle organ development [IEA]
    multicellular organismal development [IEA]
    cell differentiation [IEA]
    regulation of transcription [IEA]
    Molecular Function: transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQEATEAPA MPGEGHGHNK AKARWLLGTD RKRSRINRTR QDLWEDTSWS NHRLSRATSA  60
   61 PRGTRARGTA HGRSEASPEN AARERTRVKT LRQAFLALQA ALPAVPPDTK LSKLDVLVLA 120
  121 TSYIAHLTRT LGHELPGPAW PPFVRGLRYL HPLKKWPMRS RLYAGGLGCS DLDSTTAITT 180
  181 GQRCKDAELG SQDSVAAESL LTSPAFGNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] PSI-BLAST 16.69897 Myc prot-oncogene protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.12507195426228 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43204604575196 bayes_pls_golite062009
  • DNA binding
    		•  0.40884226851256 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.31759335140578 bayes_pls_golite062009
  • transcription factor activity
    		•  0.09721565916723 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle