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Protein Overview: gi|108807392, gi...

General Information:
Name(s) found: gi|108807392 [NCBI NR]
gi|108779305 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|108807392|ref|YP_651308.1| ribose-phosphate pyrophosphokinase [Yersinia pestis Antiqua] [NCBI NR]
  • gi|108779305|gb|ABG13363.1| ribose-phosphate pyrophosphokinase [Yersinia pestis Antiqua] [NCBI NR]
    • Organism: Yersinia pestis Antiqua
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDMKLFAGN ATPELAQRIA NRLYTSLGDA AVGRFSDGEV SVQINENVRG GDIFIIQSTC  60
   61 APTNDNLMEL VVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV 120
  121 GVDRVLTVDL HAEQIQGFFD VPVDNVFGSP ILLEDMLQQN LENPIVVSPD IGGVVRARAI 180
  181 AKLLNDTDMA IIDKRRPRAN VSQVMHIIGD VAGRDCVLVD DMIDTGGTLC KAAEALKERG 240
  241 AKRVFAYATH PIFSGNAVDN IRNSVIDEVI VCDTIPLSAE IKALKNVRTL TLSGMLAEAI 300
  301 RRISNEESIS AMFEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..315] PSI-BLAST 95.69897 Phosphoribosylpyrophosphate synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenine phosphoribosyltransferase activity
    		•  4.07252508868782 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.91023158228049 bayes_pls_golite062009
  • hypoxanthine phosphoribosyltransferase activity
    		•  3.89356447922614 bayes_pls_golite062009
  • uracil phosphoribosyltransferase activity
    		•  3.0470646511978 bayes_pls_golite062009
  • transferase activity
    		•  2.73727660668741 bayes_pls_golite062009
  • nucleobase binding
    		•  2.70671399975507 bayes_pls_golite062009
  • purine binding
    		•  2.63033967717893 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.53679639481311 bayes_pls_golite062009
  • catalytic activity
    		•  2.30431811394775 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  2.02298774328915 bayes_pls_golite062009
  • amidophosphoribosyltransferase activity
    		•  1.6596316647688 bayes_pls_golite062009
  • ribose phosphate diphosphokinase activity
    		•  1.51875493459374 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  0.749909396904601 bayes_pls_golite062009
  • binding
    		•  0.656467565014233 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.499710217109617 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.489833405048501 bayes_pls_golite062009
  • DNA binding
    		•  0.263777463202573 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle