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Protein Overview: SYM_ORYSA

General Information:
Name(s) found: SYM_ORYSA [Swiss-Prot]
Description(s) found:
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  • gi|109940177|sp|Q9ZTS1.2|SYM_ORYSJ RecName: Full=Probable methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS [NCBI NR]
  • Probable methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS) - Oryza sativa (Rice) [Swiss-Prot]
    • Organism: Oryza sativa
    Length: 801 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPPPPPKL PVPGRRNILV TSALPYVNNV PHLGNIIGCV LSADVFARYC RLRGYNVIYI  60
   61 CGTDEYGTAT ETKAMEEKCS PKEICDKYHA VHSEVYKWFD IKFDKFGRTS SPQQTEVCQA 120
  121 IFQKLMENNW LTENTMQQLY CDTCQRFLAD RLVEGKCPTE GCNYEAARGD QCENCSKLLN 180
  181 PTELIDPKCK VCKNTPRVRD TDHLFLELPL LSDKLVNYIN ETSVAGMWSQ NAIQATNAWL 240
  241 KEGLKPRCIT RDLKWGVPVP HEKYKDKVFY VWFDAPIGYV SITASYTPDW EKWWKDPDNV 300
  301 ELFQFMGKDN VPFHTVMFPS TLLGTGEKWT MMKTISVTEY LNYEAGKFSK SHGIGVFGND 360
  361 AKDTNIPPEV WRYYLLTNRP EVSDTLFTWA DLQAKLNSEL LNNLGNFINR VLSFVAKPAG 420
  421 AGYDSIVPDA PNAESHPLTK ALVEKTNKWV EQYLEAMEKV KLKQGLKSAM GISSDGNAYL 480
  481 QESQFWKLYK EDPAACAVVM KTSVGVVYLL ACLLEPFMPS FSNEVLLQLN MTPEESLSFC 540
  541 DDKGEIAKAK RPWDFVSAGH KIGKPSPLFK ELKDEEVESF RNKFAGSQAE RSSKAQADAE 600
  601 AKKVADKLKG TKLSDGGQKK EQKKQSGGSK SKNAEVDVTV AKLDIRVGLI RKAQKHPDAD 660
  661 SLYVEEIDVG EEAPRTVVSG LVKFIPLEEM QNRKVCVLCN LKPVAMRGIK SHAMVLAASN 720
  721 EDHTKVELVE PPESAAVGER VTFAGYSGEP EASLNAKSKT WEKLSADLHS NGELVACYKD 780
  781 VPFTTSAGVC KVKSIASGEI R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..732] PSI-BLAST 136.0 Methionyl-tRNA synthetase from Pyrococcus abyssi
    2 View Details [733..801] PSI-BLAST 33.0 EMAP II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle