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Protein Overview: gi|19114668

General Information:
Name(s) found: gi|19114668 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|19114668|ref|NP_593756.1| hypothetical protein SPAC6B12.01 [Schizosaccharomyces pombe 972h-] [NCBI NR]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIRSGASEV GRSLSLLTRD LRHMMEPHTA IRLKERKANK IKDYLTMAGP LGVTHLLVLS  60
   61 RTDNNANLRI IRAPRGPSLH FRIHEYMLNK DVRRLQKNPK SPTTEFLTPP LLVMNHFNQN 120
  121 SSKDSPHEAL LTTTFQNMFP PISVQHTNIN SVKRVLLLNR RDDGYIDLRH FIISTKPVGI 180
  181 SRPIRHLLKG EKKDSDIPDL HNVRDISDYV LHGDGISGAA SDSEIEEDAT VEIDRPVPTK 240
  241 TEENLLSASQ LLKPKQQAIK LIEIGPRMTL ELIKITEDAM GGKVLYHSHV HKSKEEIKQQ 300
  301 DNFHEQSRAL KEKRKKEQDE NVRRKRENKK RRKDQKKEGI TSSNKNDDSG NEGSSAYSDT 360
  361 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 14.522879 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
    2 View Details [115..291] Pfam 5.055517 No description for PF04427.9 was found. No confident structure predictions are available.
    3 View Details [292..361] MSA 1.045991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.78917266819015 bayes_pls_golite062009
  • protein binding
    		•  0.665778090365515 bayes_pls_golite062009
  • catalytic activity
    		•  0.359891129710676 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle