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Protein Overview: gi|107100948

General Information:
Name(s) found: gi|107100948 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|107100948|ref|ZP_01364866.1| hypothetical protein PaerPA_01001978 [Pseudomonas aeruginosa PACS2] [NCBI NR]
    • Organism: Pseudomonas aeruginosa PACS2
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADYPRDLI GYGNNPPHPH WPGDARIALS FVLNYEEGGE RCVLHGDKES EAFLSEMVAA  60
   61 QPLQGVRHMS MESLYEYGSR AGVWRLLKLF KRRNVPLTVF AVAMAAQRNP EVIRAMVADG 120
  121 HEICSHGYRW IDYQYMDEAQ EREHMLEAIR ILTELTGQRP VGWYTGRTGP NTRRLVMEEG 180
  181 GFLYDSDTYD DDLPYWDPAS TAEKPHLVIP YTLDTNDMRF TQVQGFNNGE QFFQYLKDAF 240
  241 DVLYEEGATA PKMLSIGLHC RLIGRPARMA ALERFIQYAQ SHDKVWFARR EDIARHWHRE 300
  301 HPFQETEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..308] PSI-BLAST 85.0 Crystal structure of conserved hypothetical protein from Pseudomonas aeruginosa PAO1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chitin deacetylase activity
    		•  10.7874217761055 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.74440177036934 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.03068569473537 bayes_pls_golite062009
  • hydrolase activity
    		•  2.65250870994632 bayes_pls_golite062009
  • deacetylase activity
    		•  2.13567346052761 bayes_pls_golite062009
  • binding
    		•  1.72578164002896 bayes_pls_golite062009
  • mannosidase activity
    		•  1.21389958583146 bayes_pls_golite062009
  • catalytic activity
    		•  1.17882014774774 bayes_pls_golite062009
  • protein binding
    		•  0.394432087623352 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  0.133068529747333 bayes_pls_golite062009
  • alpha-mannosidase activity
    		•  0.127808084365176 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle