Protein Overview: SCFD1_MOUSE

General Information:
Name(s) found:	SCFD1_MOUSE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|58037481\|ref\|NP_084101.1\| Sec1 family domain containing 1 [Mus musculus] [NCBI NR] ref\|XP_126906.3\| sec1 family domain containing 1 [Mus musculus] [NCBI NR] gi\|51316833\|sp\|Q8BRF7.1\|SCFD1_MOUSE RecName: Full=Sec1 family domain-containing protein 1; AltName: Full=Syntaxin-binding protein 1-like 2 [NCBI NR] gi\|26336937\|dbj\|BAC32152.1\| unnamed protein product [Mus musculus] [NCBI NR] (Q8BRF7) Sec1 family domain containing protein 1 (Syntaxin binding protein 1-like 2) [Swiss-Prot] Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):12-45692915 RSLY1P homolog [hmr_yeast5_DM3-1_pombe.fasta] sec1 family domain containing 1 [Mus musculus]gi\|26336937\|dbj\|BAC32152.1\| unnamed protein product [Mus musculus]gi\|51316833\|sp\|Q8BRF7\|SFD1_MOUSE Sec1 family domain containing protein 1 (Syntaxin binding protein 1-like 2) [nrdb_11152004_Chlamydomonas] Splice Isoform 1 of Sec1 family domain containing protein 1 [ipi.MOUSE.v3.06.fasta] Tax_Id=10090 Splice Isoform 1 of Sec1 family domain-containing protein 1 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta] sec1 family domain containing 1 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta] Tax_Id=10090 Splice Isoform 1 of Sec1 family domain containing protein 1 [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta] Sec1 family domain-containing protein 1 (Syntaxin-binding protein 1-like 2) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10090 SPLICE ISOFORM 1 OF SEC1 FAMILY DOMAIN CONTAINING PROTEIN 1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Sec1 family domain containing 1 [Mus musculus] [NCBI-RefSeq_mouse_na_04-07-2009_con_reversed.fasta] Tax_Id=10090 Gene_Symbol=Scfd1 Isoform 1 of Sec1 family domain-containing protein 1 [mouse-ipi-250309-contam.fasta] Tax_Id=10090 Gene_Symbol=Scfd1 Isoform 1 of Sec1 family domain-containing protein 1 ENSMUSG00000020952 IPI00224219 IPI00457667 IPI00876100 IPI00457668 IPI00460705 [IPIxENS.MOUSE_plus_REVERSE.fasta] sec1 family domain-containing protein 1 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta] IPI:IPI00224219.1\|SWISS-PROT:Q8BRF7-1\|ENSEMBL:ENSMUSP00000021335\|REFSEQ:NP_084101 Tax_Id=10090 Gene_Symbol=Scfd1 Isoform 1 of Sec1 family domain-containing protein 1 [ipi.MOUSE.fasta.20090209] Isoform 1 of Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 [011711_HMR.fasta] Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=2 SV=1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta] sp\|Q8BRF7\|SCFD1_MOUSE Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
Organism:	Mus musculus
Length:	639 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IEA] membrane [IEA] Golgi apparatus [IEA] endoplasmic reticulum [IEA] cellular_component [ND] Golgi-associated vesicle [UNKNOWN] plasma membrane [UNKNOWN]
Biological Process:	vesicle-mediated transport [IEA] regulation of ER to Golgi vesicle-mediated transport [UNKNOWN] protein transport [IEA] vesicle docking during exocytosis [IEA] post-Golgi vesicle-mediated transport [UNKNOWN] transport [IEA]
Molecular Function:	syntaxin-5 binding [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSKMAATA SIRERQTVAL KRMLNFNVPH VKNSTGEPVW KVLIYDRFGQ DIISPLLSVK  60
   61 ELRDMGITLH LLLHSDRDPI PDVPAVYFVM PTEENIDRLC QDLRNQLYES YYLNFISAIS 120
  121 RSKLEDIANA ALAASAVTQV AKVFDQYLNF ITLEDDMFVL CNQNKELVSY RAINRPDITD 180
  181 TEMETVMDTI VDSLFCFFVT LGAVPIIRCS RGTAAEMVAV KLDKKLRENL RDARNSLFTG 240
  241 DPLGTGQFSF QRPLLVLVDR NIDLATPLHH TWTYQALVHD VLDFHLNRVN LEESTGVENS 300
  301 PAGARPKRKN KKSYDLTPVD KFWQKHKGSP FPEVAESVQQ ELESYRAQED EVKRLKSIMG 360
  361 LEGEDEGAIS MLSDNTAKLT SAVSSLPELL EKKRLIDLHT NVATAVLEHI KARKLDVYFE 420
  421 YEEKIMSKTT LDKSLLDVIS DPDAGTPEDK MRLFLIYYIS AQQAPSEVDL EQYKKALTDA 480
  481 GCNLSPLQYI KQWKAFAKMA STPASYGNTT TKPMGLLSRV MNTGSQFVME GVKNLVLKQQ 540
  541 NLPVTRILDN LMEMKSNPET DDYRYFDPKM LRSNDSSVPR NKSPFQEAIV FVVGGGNYIE 600
  601 YQNLVDYIKA KQGKHILYGC SEIFNATQFI KQLSQLGQK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: SCFD1_MOUSE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: