Protein Overview: COX5B_MOUSE

General Information:
Name(s) found:	COX5B_MOUSE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|6753500\|ref\|NP_034072.1\| cytochrome c oxidase, subunit Vb [Mus musculus] [NCBI NR] gi\|50531\|emb\|CAA37313.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|192924\|gb\|AAA37515.1\| cytochrome c oxidase subunit Vb [NCBI NR] gi\|117104\|sp\|P19536.1\|COX5B_MOUSE RecName: Full=Cytochrome c oxidase subunit 5B, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Vb; Flags: Precursor [NCBI NR] pir\|\|A39425 cytochrome-c oxidase (EC 1.9.3.1) chain Vb precursor - mouse [NCBI NR] (P19536) Cytochrome c oxidase polypeptide Vb, mitochondrial precursor (EC 1.9.3.1) [Swiss-Prot] Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus GN=Cox5b PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):1-37115242 Cytochrome c oxidase polypeptide Vb, mitochondrial precursor [hmr_yeast5_DM3-1_pombe.fasta] cytochrome c oxidase, subunit Vb [HMR_022704-rand.fasta] cytochrome c oxidase, subunit Vb [Mus musculus]gi\|109770\|pir\|\|A39425 cytochrome-c oxidase (EC 1.9.3.1) chain Vb precursor - mousegi\|50531\|emb\|CAA37313.1\| unnamed protein product [Mus musculus]gi\|117104\|sp\|P19536\|COXB_MOUSE CYTOCHROME C OXIDASE POLYPEPT [nrdb_11152004_Chlamydomonas] (NM_009942) cytochrome c oxidase, subunit Vb [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] cytochrome c oxidase, subunit Vb [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta] Cytochrome c oxidase subunit 5B, mitochondrial precursor (Cytochrome c oxidase polypeptide Vb) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] cytochrome c oxidase subunit Vb [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10090 Gene_Symbol=Cox5b Cytochrome c oxidase subunit 5B, mitochondrial [mouse-ipi-250309-contam.fasta] Tax_Id=10090 Gene_Symbol=Cox5b Cytochrome c oxidase subunit 5B, mitochondrial precursor [ipi.MOUSE_jw_12may08.contam.fasta] IPI:IPI00785410.1\|SWISS-PROT:P19536 Tax_Id=10090 Gene_Symbol=Cox5b Cytochrome c oxidase subunit 5B, mitochondrial [ipi.MOUSE.fasta.20090209] Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus GN=Cox5b [011711_HMR.fasta] Tax_Id=10090 Gene_Symbol=Gm11273;Cox5b Cytochrome c oxidase subunit 5B, mitochondrial [EBI_IPI_mouse_V3_87_09-27-2011_reversed.fasta] sp\|P19536\|COX5B_MOUSE Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus GN=Cox5b PE=1 SV=1 [uniprot.sptr.mouse.20130102]
Organism:	Mus musculus
Length:	128 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MASRLLRGVG ALAAQALRRT ARGAAVTRSM ASGGGVPTDE EQATGLEREI MIAAQKGLDP 60 61 YNMLPPKAAS GTKEDPNLVP SISNKRIVGC ICEEDNCTVI WFWLHKGESQ RCPNCGTHYK 120 121 LVPHQMAH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..128]	PSI-BLAST	46.30103	Cytochrome c oxidase Subunit F

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
cytochrome-c oxidase activity	0.942365217032167	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors	0.942365217032167	bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor	0.942365217032167	bayes_pls_golite062009
binding	0.925615758639096	bayes_pls_golite062009
heme-copper terminal oxidase activity	0.706848307362399	bayes_pls_golite062009
cation transmembrane transporter activity	0.0832654869651861	bayes_pls_golite062009
ion transmembrane transporter activity	0.00798941779972262	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

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Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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