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Protein Overview: RT18B_MOUSE

General Information:
Name(s) found: RT18B_MOUSE [Swiss-Prot]
Description(s) found:
Found 29 descriptions.
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  • 28S ribosomal protein S18b, mitochondrial OS=Mus musculus GN=Mrps18b PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEA]
    mitochondrion [IDA]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: translation [IEA]
    Molecular Function: structural constituent of ribosome [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPLRHTLL KLVPTLLRSS YVAQVPLQTL CTRGPPEEDA PSSLPVSPYE SEPWKYLDSE  60
   61 EYHNRYGSRP VWADYRRNHK GGVPPQRTRK TCIRNNKVAG NPCPICRDHK LHVDFRNVKL 120
  121 LEQFVCAHTG IIFHAPYTGV CMKQHKKLTQ AIQKARECGL LSYYVPQVEP RDADFGTVHG 180
  181 AVSVTPPAPT LLSGEPWYPW YSWQQPPERE LSRLRRLYQG NLLEESGPPP ESMPEMPTTP 240
  241 PAESSIEQPG SQSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] MSA 1.019983 View MSA. No confident structure predictions are available.
    2 View Details [89..167] PSI-BLAST 23.522879 No description for 1vs5R was found.
    3 View Details [168..254] MSA 1.155959 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural molecule activity
    		•  0.36378695673226 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.351838444516321 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle