General Information: |
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Name(s) found: |
FBpp0306915
[FlyBase]
Nup98-PA / FBpp0083851 [FlyBase] |
Description(s) found:
SHOW ONLY BEST |
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Organism: | Drosophila melanogaster |
Length: | 1960 amino acids |
Gene Ontology: |
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Cellular Component: |
nuclear pore
[ISS]
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Biological Process: |
phagocytosis, engulfment
[IMP]
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Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MFGGAKPSFG ATPAATSFGG FSGTTTTTPF GQSAFGKPAA PAFGNTSTFA AQPAQQSLFG 60 61 AAATPAQPAG GLFGANTSTG FGSTATAQPT AFGAFSQPQQ TSNIFGSTQT AASTSLFGQS 120 121 TLPAFGAAKP TMTAFGQTAA AQPTGSLFGQ PAAATSTTGF GGFGTSAPTT TNVFGSGTAS 180 181 AFAQPQATAV GASGVNTGTA VAKYQPTIGT DTLMKSGQAN SVNTKQHCIT AMKEFEGKSL 240 241 EELRLEDYMC GRKGPQAGNA PGAFGFGAQV TQPAQPASGG LFGSTAQPST GLFGQTVTEN 300 301 KSMFGTTAFG QQPATNNAFG AATQQNNFLQ KPFGATTTTP FAAPAADASN PFGAKPAFGQ 360 361 GGSLFGQAPA TSAAPAFGQT NTGFGGFGTT AGATQQSTLF GATPAADPNK SAFGLGTAAS 420 421 AATTGFGFGA PATSTAGGGL FGNKPATSFA APTFGATSTA STPFSNFGLN TSTAATGGGL 480 481 FNSGLNKPAT SGFGGFGATS AAPLNFNAGN TGGSLFGNTA KPGGGLFGGG TTTLGGTGAA 540 541 PTGGLFGGGT TSFGGVGGSL GGGGFGMGTN NSLTGGIMGA QPTLGIMTPS HQPIHQQILA 600 601 RVTSPYGDSP IFKDLKLSSE ADATRATNPA AQQAVLDLTS NQYKISTSNN PAPMKVKALG 660 661 STLNRKSLFD GLEEFDASVE GFNLKPSAKR LVIKPKVKSV EGGNPSSSIG SAPNTPQSRP 720 721 KGATPNKERE SFSGAIPSEP LPPAGNSPGA TNGRESQDNG RRESWLHPNN LEKVRQHNIQ 780 781 TGMDQGSPHN STLNELVPRK PLDTYRPSST VRLSVSTIPE NPFEDQSSTI ARRETFTSQQ 840 841 ANESVLSNRS NEAEDSAANQ SRLAIEAAAA EAADDESHPT GIVLRRVGYY TIPSLDDLRS 900 901 YLAEDGSCVV PNFTVGREGY GNVFFGKEMD VAGLNLDEIV HFRNKEIIIY PDDENKPPIG 960 961 QGLNRDAQVT LDQVWPLDKT KHEAIKDPQR LLEMDWEGKL RRVCDKNDTR FIEYRPETGS1020 1021 WVFRVKHFSK YGLGDSDEED ELPTDPKKAK IATLEAQQRA NAEKMTLNSL RQAQKISEDA1080 1081 ARNLDPKALV AGVASGFRPM DDTAEFLLMD KTQFFQAGGN SDFSMFDPPR QRPTITSPTA1140 1141 VLAQEMVGNE AHKMQLMKSS FFVEDNAPED EPMETTGRLL RHRKFFNVEP LVWKDGASES1200 1201 SSQYDFEHPS PALPISSSVS EASLMCDAHY EETSSMATGS IVAAVKETKF EMPVTKAFKF1260 1261 VCKPKVAPIK LRATTVPLPR SIAYEMRDNW IADLGFYKGR SFKLSFGPQN SLVLPSTYNN1320 1321 MQNLKEFTGP SLPVSMVFAP RSATDLSPSV MQLVEFNMVK GNEGFRESII PHLEVQLNDC1380 1381 LSVNVEGSEC PCIHPDSGTK LVSKHFSESL KQRNAGLKED YSVSVWSLLF ALWGDHDELV1440 1441 DLEKNSHYMV MCRRNLLSEW LENTLLGKDL LSKKVSTHSY LEHMLDLLSC HRVNEACELA1500 1501 FSYDDANLAL VLSQLSSGAV FRLLMEEQLF AWQQSKSDKY IDLERLKMYM LAAGAPMMQS1560 1561 SHGAINLLEN KNWLTALALQ LWYFTAPTSS ITDALNAYND AFQAEECYAE PPKPSYRDAP1620 1621 TDTKKPVYDL RYHLLQLHSK RMHSLEETLN PITHTADAMD FRLSWLLLQT LRALGYRHCS1680 1681 PLTEARLSVD FASQLENEGL WQWGIFVLLH IKQQTQRERA VQQMLQRNVS VSAKVALYAE1740 1741 ERFIVEELGI PMSWVDYAKA VKAGASGKHH LQAKYLLKAK HFATAHDVIF QHIAPDAIIN1800 1801 GKMKYLHSLL IQFEDTEGSS IRVPNWANQG QIFLDFIDIS AKFKQIRSVT NIADINARWE1860 1861 NLKPQLSELC SRISLLPCPT SKHRLCQSEI SQSLSCLVHG MCIVCPEMES STVLKVALER1920 1921 LPLPQEFASK ELRIWLEELL DKIQNEPPFS ERQQPTMMEI |
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..883] | 72.522879 | No description for 1y0fB was found. | |
2 | View Details | [884..1031] | 67.045757 | C-terminal autoproteolytic domain of nucleoporin nup98 | |
3 | View Details | [1032..1275] | N/A | No confident structure predictions are available. | |
4 | View Details | [1276..1801] | 1.72 | No description for 2pm6A was found. | |
5 | View Details | [1802..1960] | N/A | No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||
1 | No functions predicted. | |||||||||||||||
2 |
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3 | No functions predicted. | |||||||||||||||
4 | No functions predicted. | |||||||||||||||
5 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.17 |
Source: Reynolds et al. (2008)