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Protein Overview: FBpp0306724, CG7...

General Information:
Name(s) found: FBpp0306724 [FlyBase]
CG7922-PA / FBpp0083508 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • type=protein; loc=3R:join(17308109..17308183,17308241..17308574,17308703..17309577,17309674..17312325,17312389..17312600,17312655..17312976); ID=FBpp0306724; name=CG7922-PB; parent=FBgn0038889,FBtr0334662; dbxref=FlyBase:FBpp0306724,FlyBase_Annotation_IDs:CG7922-PB,REFSEQ:NP_001262806,GB_protein:AGB96186; MD5=e7a5c144d0e10f1cccdef6aaa8709588; length=1489; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG7922 (CG7922, FBgn0038889). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:17308047..17312976. It has the cytological map location 93E2. Based on sequence similarity, it is predicted to have molecular function</span>: helicase activity; ATP-dependent RNA helicase activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1489 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: ATP binding [IEA]
    DNA binding [IEA]
    helicase activity [ISS]
    ATP-dependent RNA helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVNWMDDDE DLVAALAMHE EQKSEDADGT RWEHCDEACD GFDMATGHNW IYPNNLPLRS  60
   61 YQQTIVQSAL FKNTLVVLPT GLGKTFIAAV VMYNFYRWYP KGKIVFMAPT RPLVSQQIHA 120
  121 SQKIMPFPSE DTVQLTGQLP RPKRAELWAS KRVFFATPQV VHSDMLEADG ECSFPFGSIK 180
  181 LIVVDEAHRA KGRYAYTQVA DCLMARNRYF RMLALSATPG RTMEDVAAVC RNLYISNLQV 240
  241 RWDTSIDVQP YIHRRTIRTI VVSLKERIKE PRERLLQIIE PYLRQLMEAE IFKGNKGTVS 300
  301 RNSLLFEQKS FVERSAQGQR HPDHNIIMGN FAMCISMYHS LDLMERHGLR VFVNNFDADD 360
  361 DGREKFVLAR DGNLRNLVEQ VRQELGANPL DYTTHAMTNG EVPPLPSDLD FGHAKYEKLR 420
  421 QVLVQHFQAN PDSRAIVFCE YRESVMLIHR LLLQHRPVLR PRCFVGQGST VGASYALTQK 480
  481 QQLQIMTDFR SGTSNVLVAT SIGEEGLDVG EVEMIVCFDI CSTNPTRFIQ RIGRTGRKKN 540
  541 GEVVMLVTEG REQQVLKDVL ANKDQINKKL LNSSVVKLSL YEQNPRMVPS KFQPKCEEKH 600
  601 MEPVAEEKPK PKSAAKTKES RKRKQPVAQT GSLRKYFKES PPTESQQGIL QGIKPYQMSE 660
  661 ASQQLVKQQV LRRSVTLKNF FGESQASSTL TSSQEDVQRL RKLTRLLQSS KPFVSDSKDL 720
  721 MSHLQDDHLP RQIKLYLLKS NPEFLRETHL KMQVQSELNI ADDRLNSRQR RTKNNYQLLL 780
  781 DICDGMDQMN ELLQGDNSGA EISFRDELNP IYNQSPKKFD TICEQIFDGL NEHGLNSNNF 840
  841 ELKQDLLEKL ELRNLETTVN EQLGGIEASW SEEEWDQQEE DVKFESMYLS QQLNLPDANV 900
  901 VPHSSTPLRV KPLSKLMFKT LQGDIEEEYH SGMEASELGD NLGRLNSLMN ASESKIKATE 960
  961 RIAPIPVVDS TIETNHFPAV EESQRSTPIS IADSSGESNH CAVNKNSEIY PMSIDETKVE1020
 1021 VKSSLNLKMH AESIVEDLDI DLDDFLEPMD KELELASQTK GKSQENIVDH QMEKLEKNCE1080
 1081 QKETAHNNDL DLTDEDLKEF LEPMVEEVEL MSQKKANDFK DFLEPMPEEL ELMSQQKKNI1140
 1141 LLPSTETIKN SENKNSHEDG SRTVSPDIFG SDSMSPLKPQ GKSLAAKLAA KAAAKVLPCP1200
 1201 PPNSVGLNSP ENRKRTNPSI QEKSPSIFDL YLNRMRGRGR LAKAAENLHR ITSTNPTISV1260
 1261 PKDEEDSPIA RRPSKRKIVI SSDEEEEQKP QIAETQVDCE SDDYERILDT QMPDPRKTPT1320
 1321 RPRHKRSKFN SFILDEAEKS GSDHEEEGET TIGTYLKDSM IVSSDDEDHN DTNTHAIYLR1380
 1381 ALKSPIQRPG AFKMPPPRVF RDESHIFSQP VEDDSSQYMQ CSFIVDDESS TIERGHDVSE1440
 1441 CPLEKAERIL KERRKQRRLG KVPSAPVNKR RRLQTISTSS DEDDVVLID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] PSI-BLAST 14.0 No description for 2ipcA was found.
    2 View Details [72..581] PSI-BLAST 39.522879 Crystal structure of Pyrococcus furiosus Hef helicase domain
    3 View Details [582..668] deduced N/A No confident structure predictions are available.
    4 View Details [669..809] PSI-BLAST 4.154902 No description for 2datA was found.
    5 View Details [810..877] deduced N/A No confident structure predictions are available.
    6 View Details [878..1038] PSI-BLAST 5.30103 No description for 2dfsA was found.
    7 View Details [1039..1369] PSI-BLAST 14.69897 Heavy meromyosin subfragment
    8 View Details [1370..1489] MSA 1.265981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle