YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|1082336, gi|5...

General Information:
Name(s) found: gi|57209027 [NCBI NR]
gi|57162137 [NCBI NR]
gi|55959572 [NCBI NR]
gi|452404 [NCBI NR]
gi|4506495 [NCBI NR]
gi|119579203 [NCBI NR]
gi|119579199 [NCBI NR]
gi|1082336 [NCBI NR]
Description(s) found:
Found 29 descriptions.
SHOW ALL
  • gi|57209027|emb|CAI41216.1| regulatory factor X, 3 (influences HLA class II expression) [Homo sapiens] [NCBI NR]
  • gi|57162137|emb|CAI40200.1| regulatory factor X, 3 (influences HLA class II expression) [Homo sapiens] [NCBI NR]
  • gi|55959572|emb|CAI13404.1| regulatory factor X, 3 (influences HLA class II expression) [Homo sapiens] [NCBI NR]
  • gi|452404|emb|CAA53706.1| DNA binding protein RFX3 [Homo sapiens] [NCBI NR]
  • gi|4506495|ref|NP_002910.1| regulatory factor X3 isoform a [Homo sapiens] [NCBI NR]
  • gi|119579203|gb|EAW58799.1| regulatory factor X, 3 (influences HLA class II expression), isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119579199|gb|EAW58795.1| regulatory factor X, 3 (influences HLA class II expression), isoform CRA_b [Homo sapiens] [NCBI NR]
  • pir||D55926 DNA binding protein RFX3 - human [NCBI NR]
    • Organism: Homo sapiens
    Length: 707 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTSETGSDT GSTVTLQTSV ASQAAVPTQV VQQVPVQQQV QQVQTVQQVQ HVYPAQVQYV  60
   61 EGSDTVYTNG AIRTTTYPYT ETQMYSQNTG GNYFDTQGSS AQVTTVVSSH SMVGTGGIQM 120
  121 GVTGGQLISS SGGTYLIGNS MENSGHSVTH TTRASPATIE MAIETLQKSD GLSTHRSSLL 180
  181 NSHLQWLLDN YETAEGVSLP RSTLYNHYLR HCQEHKLDPV NAASFGKLIR SIFMGLRTRR 240
  241 LGTRGNSKYH YYGIRVKPDS PLNRLQEDMQ YMAMRQQPMQ QKQRYKPMQK VDGVADGFTG 300
  301 SGQQTGTSVE QTVIAQSQHH QQFLDASRAL PEFGEVEISS LPDGTTFEDI KSLQSLYREH 360
  361 CEAILDVVVN LQFSLIEKLW QTFWRYSPST PTDGTTITES SNLSEIESRL PKAKLITLCK 420
  421 HESILKWMCN CDHGMYQALV EILIPDVLRP IPSALTQAIR NFAKSLEGWL SNAMNNIPQR 480
  481 MIQTKVAAVS AFAQTLRRYT SLNHLAQAAR AVLQNTSQIN QMLSDLNRVD FANVQEQASW 540
  541 VCQCDDNMVQ RLETDFKMTL QQQSTLEQWA AWLDNVMMQA LKPYEGRPSF PKAARQFLLK 600
  601 WSFYSSMVIR DLTLRSAASF GSFHLIRLLY DEYMFYLVEH RVAQATGETP IAVMGEVREA 660
  661 ERAVTHWVIK NKPELHFSLN TLLIKTMVPN QVSLRARRDC GVIARVP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] Pfam 91.055517 No description for PF04589.3 was found. No confident structure predictions are available.
    2 View Details [173..325] PSI-BLAST 29.522879 Class II MHC transcription factor RFX1
    3 View Details [326..401] deduced N/A No confident structure predictions are available.
    4 View Details [402..608] deduced N/A No confident structure predictions are available.
    5 View Details [609..707] MSA 2.029984 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle