YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|108862892

General Information:
Name(s) found: gi|108862892 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|108862892|gb|ABA99724.2| hAT family dimerisation domain containing protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1041 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGKYLWKPL LRFSGESYRF SPLSRSCAQD RRGDGVRPRQ IRRLRAGEAG SRAVSGGNRA  60
   61 VRDGNRLGRR ARGNPSVLKV FARVEMSDSR DPVWEHGENI PPGWRCKYCH TKRGGGGATR 120
  121 LKQHLAARGK GVTYCNSVPP DVREFFCREL DRIKDAGDQR KSDSGRRVEA ARVNYYDLTG 180
  181 DADEEEQMEA AIAVSRQDEN FRRDVEERGG TYEHGGGSGS AQPEARKGRS NPITNMLRRA 240
  241 TSHRESPAVR DYNLASAKAP VQPRIDTGFF TKKGKQARQA IGESWARFFF TAGIPGRNAD 300
  301 NPYFVSAVRE TQKWGESVPS PTGNEIDGKY LDSTEKDVKK QFDRFKKDWD EYGVTIMCDS 360
  361 WTGPTSMSVI NFLIYCNGIM FFHKSIDATG QSQDANFVLK EIRKVVREIG SEHVVQIITY 420
  421 NGSNYKKACR LLRQEYKTIV WQPCVAHTVN LMLKEVGKMP DHEMVIESAR KICRWLYNHN 480
  481 KLHAMMVLAI GGELVKWNAT RFGTNYMFLQ SFLRKRDLFM QWMASSVFMQ SKFSGTLEGK 540
  541 YAHACLSSLS WWENLEAVVN SVQPMYSFLR FADEDKNPNL SEVLLRYQLL KMEYDSLFAN 600
  601 QRDKFEAYME IVNRRMHNLT NETLINAAAA LNPRTHYAYS PSATVFQDLR QAFEWMTDID 660
  661 TAAAALLEVE MYRRKTGEFG RALARRMAID GKTSPAQWWS MFASDTPNLK KLALRLVGQC 720
  721 CSSSGCERNW STFAFVHTKV RNRLTHKKLN KLVYVNYNLR LRIQQANAQI RVEDDDPLQR 780
  781 LADLSFYETN NHISAWMDNA RSNACPELDE DSAESDAPLP SQLVSDLVNL DDLRRTTGAS 840
  841 SIAEWADTNV GDTHIGKRKT RKPPKARPSK KVKGKGPRST SVDSDEETQG SPEYQESNDS 900
  901 SSRTETDDGD DDGEGDFTHA TQDQDHGAPS SQRTTIAPGV RQQQQFSDIQ QDSSSSFSAS 960
  961 SFESGYPTYV YNRPQASDYP ATTWVYEWQE PQCSNISRLP SSYRGYRTKP CGYRVHTVDF1020
 1021 EFKNLETKFV RFFAVTARLP R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..177] Pfam 18.886057 No description for PF07567.4 was found. No confident structure predictions are available.
    3 View Details [178..273] deduced N/A No confident structure predictions are available.
    4 View Details [274..780] PSI-BLAST 52.0 Three-dimensional structure of the Hermes DNA transposase
    5 View Details [781..1041] MSA 10.206997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle