| Protein: | gi|108862892 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1041 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108862892.
| Description | E-value | Query Range |
Subject Range |
|
|
715.0 | [0..1] | [1020..1] |
|
|
376.0 | [0..42] | [815..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MGGKYLWKPL LRFSGESYRF SPLSRSCAQD RRGDGVRPRQ IRRLRAGEAG SRAVSGGNRA 60
61 VRDGNRLGRR ARGNP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [76-177] |
1 11 21 31 41 51
| | | | | |
1 SVLKVFARVE MSDSRDPVWE HGENIPPGWR CKYCHTKRGG GGATRLKQHL AARGKGVTYC 60
61 NSVPPDVREF FCRELDRIKD AGDQRKSDSG RRVEAARVNY YD
|
| Detection Method: | |
| Confidence: | 18.886057 |
| Match: | PF07567.4 |
| Description: | No description for PF07567.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [178-273] |
1 11 21 31 41 51
| | | | | |
1 LTGDADEEEQ MEAAIAVSRQ DENFRRDVEE RGGTYEHGGG SGSAQPEARK GRSNPITNML 60
61 RRATSHRESP AVRDYNLASA KAPVQPRIDT GFFTKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [274-780] |
1 11 21 31 41 51
| | | | | |
1 GKQARQAIGE SWARFFFTAG IPGRNADNPY FVSAVRETQK WGESVPSPTG NEIDGKYLDS 60
61 TEKDVKKQFD RFKKDWDEYG VTIMCDSWTG PTSMSVINFL IYCNGIMFFH KSIDATGQSQ 120
121 DANFVLKEIR KVVREIGSEH VVQIITYNGS NYKKACRLLR QEYKTIVWQP CVAHTVNLML 180
181 KEVGKMPDHE MVIESARKIC RWLYNHNKLH AMMVLAIGGE LVKWNATRFG TNYMFLQSFL 240
241 RKRDLFMQWM ASSVFMQSKF SGTLEGKYAH ACLSSLSWWE NLEAVVNSVQ PMYSFLRFAD 300
301 EDKNPNLSEV LLRYQLLKME YDSLFANQRD KFEAYMEIVN RRMHNLTNET LINAAAALNP 360
361 RTHYAYSPSA TVFQDLRQAF EWMTDIDTAA AALLEVEMYR RKTGEFGRAL ARRMAIDGKT 420
421 SPAQWWSMFA SDTPNLKKLA LRLVGQCCSS SGCERNWSTF AFVHTKVRNR LTHKKLNKLV 480
481 YVNYNLRLRI QQANAQIRVE DDDPLQR
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [781-1041] |
1 11 21 31 41 51
| | | | | |
1 LADLSFYETN NHISAWMDNA RSNACPELDE DSAESDAPLP SQLVSDLVNL DDLRRTTGAS 60
61 SIAEWADTNV GDTHIGKRKT RKPPKARPSK KVKGKGPRST SVDSDEETQG SPEYQESNDS 120
121 SSRTETDDGD DDGEGDFTHA TQDQDHGAPS SQRTTIAPGV RQQQQFSDIQ QDSSSSFSAS 180
181 SFESGYPTYV YNRPQASDYP ATTWVYEWQE PQCSNISRLP SSYRGYRTKP CGYRVHTVDF 240
241 EFKNLETKFV RFFAVTARLP R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
