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Protein Overview: gi|115455707, gi...

General Information:
Name(s) found: gi|215713546 [NCBI NR]
gi|115455707 [NCBI NR]
gi|113549925 [NCBI NR]
gi|108711385 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|215713546|dbj|BAG94683.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115455707|ref|NP_001051454.1| Os03g0780900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113549925|dbj|BAF13368.1| Os03g0780900 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108711385|gb|ABF99180.1| AFR615Wp, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 413 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRGFDSEG REFSSATEMW AHEIGAAADA PVSAAVAEPA PAPAAGSNGV AGEEEAGGGG  60
   61 KREEWYSKAI AYWQGVEAST EGVLGGYGCV NDVDVKGSDA FLRPLLAERF GAARRHLVAL 120
  121 DCGSGIGRVT KNFLLRHFNE VDLVEPVSHF LEAAQENLTE CMEVGEDTHK AANFYCVPLQ 180
  181 DFTPDEGRYD VIWIQWCIGQ LPDDDFISFF NRAKIGLKPN GFFVLKENIA RNGFVLDKED 240
  241 NSITRSDAYF KELFKKCGLY IHSIKDQSDL PKELFAVKMY ALVTEKPKIQ KNGKRRRPKN 300
  301 SPPVEKSVSD NNSLSVPRFV PADFETRLEL IPFVRGVSQL VSPASGPSPF TELNEFDEGC 360
  361 TAVTRSGTFS PLQHGAVRSG PPRRVQGPST SARGRPWSKK PGARGGGRIP KAG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 34.154902 Structural Analysis of Leishmania major LMAJ004091AAA, a SAM-dependent methyltransferase of the DUF858/Pfam05891 family
    2 View Details [284..413] PSI-BLAST 24.0 The crystal structure of YcgJ protein from Bacillus subitilis at 2.1 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • methyltransferase activity
    		•  3.57681394097837 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  3.49392219433935 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  3.07428840534971 bayes_pls_golite062009
  • transferase activity
    		•  2.926540904444 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  2.5924681776558 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  1.76571145896453 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  1.57269280784007 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.94499223839747 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.914549843668268 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
    		•  0.794703281700029 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
    		•  0.716476158062361 bayes_pls_golite062009
  • DNA binding
    		•  0.71058003448013 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.698509190696763 bayes_pls_golite062009
  • binding
    		•  0.383237930789959 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.0854264678700428 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.0408000230099101 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle