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Protein Overview: gi|115452749, gi...

General Information:
Name(s) found: gi|215740544 [NCBI NR]
gi|125586094 [NCBI NR]
gi|115452749 [NCBI NR]
gi|113548446 [NCBI NR]
gi|108707897 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|215740544|dbj|BAG97200.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125586094|gb|EAZ26758.1| hypothetical protein OsJ_10671 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115452749|ref|NP_001049975.1| Os03g0323800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548446|dbj|BAF11889.1| Os03g0323800 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108707897|gb|ABF95692.1| mitochondrial import receptor subunit TOM40, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSAASAAAP PPPPTAQPHM AAPPYGAGLA GILPPKPDGE EEGKKKEVEK VDYLNLPCPV  60
   61 PFEEIQREAL MSLKPELFEG LRFDFTKGLN QKFSLSHSVF MGSLEVPSQS TETIKVPTSH 120
  121 YEFGANFIDP KLILVGRVMT DGRLNARVKC DLTDDLTLKI NAQLTHEPHY SQGMFNFDYK 180
  181 GTDYRAQFQI GNNAFYGANY IQSVTPNLSM GTEIFWLGHQ RKSGIGFASR YNSDKMVGTL 240
  241 QVASTGIVAL SYVQKVSEKV SLASDFMYNH MSRDVTSSFG YDYMLRQCRL RGKFDSNGVV 300
  301 AAYLEERLNM GVNFLLSAEI DHSKKNYKFG FGMTVGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] MSA 2.111993 View MSA. No confident structure predictions are available.
    2 View Details [110..337] FFAS03 0.972 Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  3.87695992157613 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.5080651290341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.91519653240805 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.52441501582582 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.16032865308605 bayes_pls_golite062009
  • binding
    		•  1.13350265978473 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.06194702708439 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.785081770914896 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.70830071774499 bayes_pls_golite062009
  • protein binding
    		•  0.245465750868313 bayes_pls_golite062009
  • signal transducer activity
    		•  0.207928441293698 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.207928441293698 bayes_pls_golite062009
  • receptor activity
    		•  0.180516292992167 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle