| Protein: | gi|115452749, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 337 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115452749, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..29] | [336..1] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MGSAASAAAP PPPPTAQPHM AAPPYGAGLA GILPPKPDGE EEGKKKEVEK VDYLNLPCPV 60
61 PFEEIQREAL MSLKPELFEG LRFDFTKGLN QKFSLSHSVF MGSLEVPSQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [110-337] |
1 11 21 31 41 51
| | | | | |
1 STETIKVPTS HYEFGANFID PKLILVGRVM TDGRLNARVK CDLTDDLTLK INAQLTHEPH 60
61 YSQGMFNFDY KGTDYRAQFQ IGNNAFYGAN YIQSVTPNLS MGTEIFWLGH QRKSGIGFAS 120
121 RYNSDKMVGT LQVASTGIVA LSYVQKVSEK VSLASDFMYN HMSRDVTSSF GYDYMLRQCR 180
181 LRGKFDSNGV VAAYLEERLN MGVNFLLSAE IDHSKKNYKF GFGMTVGE
|
| Detection Method: | |
| Confidence: | 0.972 |
| Match: | 1t16A |
| Description: | Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 3.87695992157613 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.5080651290341 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.91519653240805 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.52441501582582 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.16032865308605 | bayes_pls_golite062009 |
| binding | 1.13350265978473 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.06194702708439 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.785081770914896 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.70830071774499 | bayes_pls_golite062009 |
| protein binding | 0.245465750868313 | bayes_pls_golite062009 |
| signal transducer activity | 0.207928441293698 | bayes_pls_golite062009 |
| molecular transducer activity | 0.207928441293698 | bayes_pls_golite062009 |
| receptor activity | 0.180516292992167 | bayes_pls_golite062009 |
