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Protein Overview: gi|125585956, gi...

General Information:
Name(s) found: gi|125585956 [NCBI NR]
gi|115452525 [NCBI NR]
gi|113548334 [NCBI NR]
gi|108707689 [NCBI NR]
Description(s) found:
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  • gi|125585956|gb|EAZ26620.1| hypothetical protein OsJ_10523 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115452525|ref|NP_001049863.1| Os03g0301200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548334|dbj|BAF11777.1| Os03g0301200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108707689|gb|ABF95484.1| COBRA-like protein 7 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os03g0301200 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • COBRA-like protein 7 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 671 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGCIVVVFG VLVLVAGMAA AQGQVPSPTP AAAAAAPAPT PDCNGILLTY NFEGRAKIRP  60
   61 YVADRNKQPY SFRANATVLN SGTRPLKSWA MLVTFGYGEI LVGVDGAVLT GGGEMPYNTT 120
  121 QDAGNATSFS GYPQTDLLTP IATAGDISQI QAKVGIVGTL FAGPGPFVPL PTALSLDDPA 180
  181 YRCPQETNVS SGVLSTCCVL TPEAEANATV INANATDPTK NFLPRGTGDL VITYDVLQAY 240
  241 PSSYLALVTL DNNAKLGRLD NWRLSWEWRR GEFIYSMKGA YPSEKDTTGC IYGAAGQYYQ 300
  301 SLDFSQVLNC DKKPVILDLP LSRYNDTQIG KIDHCCRNGT ILPKSMDETQ SKSAFQLQVF 360
  361 KMPPDLNRTK LFPPANFKIA GASSLNPDYT CGQPVPVSPT EFPDPSGLDS TTLAIATWQV 420
  421 VCNITTSKGA KPKCCVTFSA YYNDSVIPCN TCACGCPSNQ RGPTCSTTAQ SMLLPPEALL 480
  481 VPFDNRTQKA LAWAELKHYN VPKPMPCGDY CGVSINWHIS TDYNKGWSAR MTLFNWDNVD 540
  541 LANWFAAIVM DKAYDGFEKA YSFNSTSVGK NTIFMQGLEG LNYLVKQTNM SGSDYLVPGK 600
  601 QQSVLSFTKK LTPGINVVAG DGFPSKVFFN GDECAMPQRI PMSNSGFRTH LSSVLSLVLV 660
  661 LAASAFVLLQ Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] deduced N/A No confident structure predictions are available.
    2 View Details [212..469] Pfam 107.283997 No description for PF04833.6 was found. No confident structure predictions are available.
    3 View Details [470..671] MSA 10.035973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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