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Protein Overview: gi|108707614

General Information:
Name(s) found: gi|108707614 [NCBI NR]
Description(s) found:
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  • gi|108707614|gb|ABF95409.1| DnaJ domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • DnaJ domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIPVRSLLV ASIVLSSIAL HVAAAKNLDP YKVLGVDKSA SQRDIQKAFH KLSLKYHPDK  60
   61 NKSKGAQEKF AEINNAYDIL SDEEKRKNYD LYGDEKGNPG FGGGNFGNRE GYTYFTGGGA 120
  121 KTSHFSSGDG WQTMGGQGNT KTFSFSFGGG NPGAGGGNPF NFDFGDVFSN IFSGGSMGGS 180
  181 QHTGSAGKAR RGTKSSGHDS SSVNIQEVTM QIFNKETADQ GITWLLLFYT PNTKGQFVLE 240
  241 SVVEDVARSL DGALRAGKVN CDHEKALCKK AGVSIGKSAR LFIYSYTTTE KGSLHEYSGD 300
  301 YDSKSLKTFC QEHLPRFSKR VDINQFSFPS NIIPNLPQVL LLSAKKDTPA MWRAVSGMFR 360
  361 SRLIFYDAEV QDVSHPLLKS LGVKNIPALI GRSVNGEEQL LKDGISVKDL RSGIKELKNL 420
  421 LENFEKKNKK LASNQAKKPA HTDQPKENKI PLLTASNFEE ICGEKTSVCI LGIFKSSKAK 480
  481 ENLEAVLSEI SQKTLIRGQN YNSGNAVAYA LLDGNKQSAF LSTFDKSAFK SSDKLLLAYK 540
  541 PRRGRYAVYD NEVTMEEAES LPVTEYMLLV RNRTLVESLL LQQAGLCRLL AHTFGPAQRV 600
  601 VGSKHSSPGP DLRMASRSLS PLSSASKLCS RCGQADEPKM AATTFSSSPS KVTTAKFVTG 660
  661 LRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 22.69897 Solution structure of the J domain of the pseudo DnaJ protein, mouse hypothetical mKIAA0962
    2 View Details [112..177] PSI-BLAST 17.09691 The crystal structure of Hsp40 Ydj1
    3 View Details [178..663] PSI-BLAST 37.522879 Crystal Structure of Yeast Protein Disulfide Isomerase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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