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Protein Overview: gi|108707431, gi...

General Information:
Name(s) found: gi|222624650 [NCBI NR]
gi|108707432 [NCBI NR]
gi|108707431 [NCBI NR]
Description(s) found:
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  • gi|222624650|gb|EEE58782.1| hypothetical protein OsJ_10309 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108707432|gb|ABF95227.1| zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108707431|gb|ABF95226.1| zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • zinc finger family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVFRGSRG DIEAGGFPGF APERRAMRIH AGGRPVNSNL AFLVTVLMLF MVLNSHQMSP  60
   61 NFLVWLVLGV FLMATSLRMY ATCQQLQAQA QAHAAAANGF LGHTELRVHV PPTIALATRG 120
  121 RLQSLRLQLA LLDREFDDLD YDALRALDAD NSPHAPSMSE EEINALPVFK YKVQAHQGSA 180
  181 SFRKSDGPSQ PSVSSTESGN EKKQDRFKAD ATDNTLEDEL TCSVCLEQVV VGDLLRSLPC 240
  241 LHQFHANCID PWLRQQGTCP VCKHRVSDGW HGEADASNMV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] deduced N/A No confident structure predictions are available.
    2 View Details [213..280] PSI-BLAST 13.69897 EL5 RING-H2 domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle