YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108707431, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVFRGSRG DIEAGGFPGF APERRAMRIH AGGRPVNSNL AFLVTVLMLF MVLNSHQMSP  60
   61 NFLVWLVLGV FLMATSLRMY ATCQQLQAQA QAHAAAANGF LGHTELRVHV PPTIALATRG 120
  121 RLQSLRLQLA LLDREFDDLD YDALRALDAD NSPHAPSMSE EEINALPVFK YKVQAHQGSA 180
  181 SFRKSDGPSQ PSVSSTESGN EKKQDRFKAD ATDNTLEDEL TCSVCLEQVV VGDLLRSLPC 240
  241 LHQFHANCID PWLRQQGTCP VCKHRVSDGW HGEADASNMV

Type	Start	End	Confidence
Cytoplasmic	1	34	0.92
Transmembrane Helix	35	53	0.95
Non-Cytoplasmic	54	61	0.75
Transmembrane Helix	62	81	0.94
Cytoplasmic	82	280	0.91