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Protein Overview: gi|108706529

General Information:
Name(s) found: gi|108706529 [NCBI NR]
Description(s) found:
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  • gi|108706529|gb|ABF94324.1| SacIy domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • SacIy domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMAGDKFL QKFRLYETRS KFYLIGRDKT RTLWRVLKID RMEPTELEIE EDHTSYTENE  60
   61 CQELLWRIHE GNRLTGGLKF VTKCYGIVGF IKFLGPYYMV LITRRRKVGT ICSHEIYSVG 120
  121 KSELIAIPSP IVWPNVAYSR DENRYKRLLC SVDLSKDFFF SYSYNIMRSL QKNITDKNTG 180
  181 QVVYETMFVW NEFLSRAIRN HLKNTTWTVA LIHGFFKQSK LSVAGKEFWL TLIARRSRHF 240
  241 AGTRFLKRGV NEKGRVANDV ETEQIVFEDT PDEIPHQISS VVQHRGSIPL IWFQETSRLN 300
  301 IRPDIILKPD VDYKTTRLHF ENLALRYGNP IIILNLIKTR EKKPRESLLR AEFAKAIHYI 360
  361 NKGLPDDKRL KFLHMDLSKL SRRKGTNVLS LLNKVASDVL DLTDFLHCEI TTSKYEDASS 420
  421 GQGAVANSGD IENIQDQNLC ATKLVPLLLQ KGVLRTNCID CLDRTNVAQF AYGLAALGRQ 480
  481 LHVLQLNETP TIELHAPLAD DLMDFYERMG DTLAIQYGGS AAHNKIFCEQ RGQWKAATQS 540
  541 QEFLRTLQRY YSNAYTDPEK QDSINVFLGH FQPQEGKPAL WKLDSDQHYN IGRQGTLTEE 600
  601 TGRSFIKRSL SDGNILCDNT GGPVSDCNVG KNNTSSELLP MQPLEDIREP SDSAPEISIE 660
  661 PNPCSSTNYS TLSGRHSISE ERQNYLRRLG YPELHSSNFL DLDLLSSSGN SCEEEIYERS 720
  721 SLINSPMDVV SIESTTSYSE QGHNDEGRDD TDLSRSSSQM SDIRDYSDRF THWVDGGGML 780
  781 CY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] MSA 4.17099 View MSA. No confident structure predictions are available.
    2 View Details [184..329] MSA 1.177978 View MSA. No confident structure predictions are available.
    3 View Details [330..493] MSA 2.182988 View MSA. No confident structure predictions are available.
    4 View Details [494..591] MSA 2.17699 View MSA. No confident structure predictions are available.
    5 View Details [592..782] MSA 3.11799 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle