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View Structure Prediction Details

Protein: gi|108706529
Organism: Oryza sativa Japonica Group
Length: 782 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108706529.

Description E-value Query
Range
Subject
Range
gi|215712281, gi... - gi|215712281|dbj|BAG94408.1| unnamed protein product [Oryza sativa Japonica Group], gi|115451145|ref...
811.0 [0..1] [782..1]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMAGDKFL QKFRLYETRS KFYLIGRDKT RTLWRVLKID RMEPTELEIE EDHTSYTENE  60
   61 CQELLWRIHE GNRLTGGLKF VTKCYGIVGF IKFLGPYYMV LITRRRKVGT ICSHEIYSVG 120
  121 KSELIAIPSP IVWPNVAYSR DENRYKRLLC SVDLSKDFFF SYSYNIMRSL QKNITDKNTG 180
  181 QVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YETMFVWNEF LSRAIRNHLK NTTWTVALIH GFFKQSKLSV AGKEFWLTLI ARRSRHFAGT  60
   61 RFLKRGVNEK GRVANDVETE QIVFEDTPDE IPHQISSVVQ HRGSIPLIWF QETSRLNIRP 120
  121 DIILKPDVDY KTTRLHFENL ALRYGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [330-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIIILNLIKT REKKPRESLL RAEFAKAIHY INKGLPDDKR LKFLHMDLSK LSRRKGTNVL  60
   61 SLLNKVASDV LDLTDFLHCE ITTSKYEDAS SGQGAVANSG DIENIQDQNL CATKLVPLLL 120
  121 QKGVLRTNCI DCLDRTNVAQ FAYGLAALGR QLHVLQLNET PTIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [494-591]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHAPLADDLM DFYERMGDTL AIQYGGSAAH NKIFCEQRGQ WKAATQSQEF LRTLQRYYSN  60
   61 AYTDPEKQDS INVFLGHFQP QEGKPALWKL DSDQHYNI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [592-782]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRQGTLTEET GRSFIKRSLS DGNILCDNTG GPVSDCNVGK NNTSSELLPM QPLEDIREPS  60
   61 DSAPEISIEP NPCSSTNYST LSGRHSISEE RQNYLRRLGY PELHSSNFLD LDLLSSSGNS 120
  121 CEEEIYERSS LINSPMDVVS IESTTSYSEQ GHNDEGRDDT DLSRSSSQMS DIRDYSDRFT 180
  181 HWVDGGGMLC Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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