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Protein Overview: gi|115451109, gi...

General Information:
Name(s) found: gi|115451109 [NCBI NR]
gi|113547626 [NCBI NR]
gi|108706494 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|115451109|ref|NP_001049155.1| Os03g0179000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113547626|dbj|BAF11069.1| Os03g0179000 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108706494|gb|ABF94289.1| Tubulin-tyrosine ligase family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 870 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAAASPDD RIRSYEDFAR VHAYLLAASG IPPSLHQRLY RKLADEVFDG GEAFSVEPCE  60
   61 GGRQRRLVLA AEWTLGRESD VFLVDHAWSF RLSDALKQLR EVPGLAERMA ALMCVDLDER 120
  121 TELEEADEQD NGNGGSLESA LEVVEKERTR IQEKGSDFAA WLELEELGID DDMLIALDLS 180
  181 SKFPNMVALN LWGNKLQDPE KIMKGIGECR RLKALWLNEN PALKEGVDKV ILDGLPELEI 240
  241 YNSHFTRKAG EWALGFCGDI IGADNPCSSA ESIPLENIAS LDLSDRCIHK LPVVFSPRKL 300
  301 SSLLSLNIRG NPLDQMSSDD LLKLISGFTQ LQELEVDIPG SLGNSAISIL ECLPNLSLLN 360
  361 GINVASIIES GKHIIDSALK PRLPEWSPQE SLPERVIGAM WLYLMTYRLA DEEKIDETPV 420
  421 WYVMDELGSA MRHSDDANFR IAPFLFMPDG KLASAISYTI LWPVHDVHTG EECTRDFLFG 480
  481 VGEDKQRSAR LTAWFHTPEN YFIQEFRKYK EQLQSSSICP SRKVTPVTKS IRPSDGHALR 540
  541 VFTDIPQVEE FLTRPEFVLT SDPKEADIIW VSMQVDSELK NALGLTDQQY TNQFPFEACL 600
  601 VMKHHLAETI HKAWGSPEWL QPTYNLETHL SPLIGDYCVR KRDGMDNLWI MKPWNMARTI 660
  661 DTTVTGDLSA IIRLMETGPK ICQKYIECPA LFQGRKFDLR YIVFVRSICP LEIFLSDVFW 720
  721 VRLANNQYTL EKTSFFEYET HFTVMNYIGR MNHMNTPEFV KEFEKEHQVK WLEIHGRIRD 780
  781 MIRCVFESAT AVHPEMQNPF SRAIYGVDVM LDNKFNPKIL EVTYCPDCTR ACKYDTQALV 840
  841 GSQGVIRGTE FFNTVFGCLF LDELKDVSPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..616] PSI-BLAST 14.09691 No description for 2z63A was found.
    2 View Details [617..684] deduced N/A No confident structure predictions are available.
    3 View Details [685..870] MSA 8.198976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle