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View Structure Prediction Details

Protein: gi|115451109, gi...
Organism: Oryza sativa Japonica Group
Length: 870 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|115451109, gi....

Predicted Domain #1
Region A:
Residues: [1-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAAASPDD RIRSYEDFAR VHAYLLAASG IPPSLHQRLY RKLADEVFDG GEAFSVEPCE  60
   61 GGRQRRLVLA AEWTLGRESD VFLVDHAWSF RLSDALKQLR EVPGLAERMA ALMCVDLDER 120
  121 TELEEADEQD NGNGGSLESA LEVVEKERTR IQEKGSDFAA WLELEELGID DDMLIALDLS 180
  181 SKFPNMVALN LWGNKLQDPE KIMKGIGECR RLKALWLNEN PALKEGVDKV ILDGLPELEI 240
  241 YNSHFTRKAG EWALGFCGDI IGADNPCSSA ESIPLENIAS LDLSDRCIHK LPVVFSPRKL 300
  301 SSLLSLNIRG NPLDQMSSDD LLKLISGFTQ LQELEVDIPG SLGNSAISIL ECLPNLSLLN 360
  361 GINVASIIES GKHIIDSALK PRLPEWSPQE SLPERVIGAM WLYLMTYRLA DEEKIDETPV 420
  421 WYVMDELGSA MRHSDDANFR IAPFLFMPDG KLASAISYTI LWPVHDVHTG EECTRDFLFG 480
  481 VGEDKQRSAR LTAWFHTPEN YFIQEFRKYK EQLQSSSICP SRKVTPVTKS IRPSDGHALR 540
  541 VFTDIPQVEE FLTRPEFVLT SDPKEADIIW VSMQVDSELK NALGLTDQQY TNQFPFEACL 600
  601 VMKHHLAETI HKAWGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.09691
Match: 2z63A
Description: No description for 2z63A was found.

Predicted Domain #2
Region A:
Residues: [617-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEWLQPTYNL ETHLSPLIGD YCVRKRDGMD NLWIMKPWNM ARTIDTTVTG DLSAIIRLME  60
   61 TGPKICQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [685-870]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YIECPALFQG RKFDLRYIVF VRSICPLEIF LSDVFWVRLA NNQYTLEKTS FFEYETHFTV  60
   61 MNYIGRMNHM NTPEFVKEFE KEHQVKWLEI HGRIRDMIRC VFESATAVHP EMQNPFSRAI 120
  121 YGVDVMLDNK FNPKILEVTY CPDCTRACKY DTQALVGSQG VIRGTEFFNT VFGCLFLDEL 180
  181 KDVSPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle