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Protein Overview: gi|108705794

General Information:
Name(s) found: gi|108705794 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|108705794|gb|ABF93589.1| LysM domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVPSAPAPD AHRRGVFLLS VGAGGGGAGT AVVEVEVEHP HSLSLSPPPM SSCGRYILHR  60
   61 VCRFDTLAGV AIKYGVEVAD VKRVNGLTTD LQMFAHKTLR IPLPGRHPPA ATATATAPSH 120
  121 PPPSSSPAAT HRPREWATRR PPKNSALDPL LKPPQSTVAP SMDLLQNYYG LARPPKGDPE 180
  181 NEGTEMATYS IGQHTKARSL STGFSLVNGE VDDAEKPIRR RQKSDAEFST REGNSGGVLM 240
  241 KAGPGLALRP KSGSRPEINN SQQDLVATAV PSYGDGLQAV RKSSSTPEFQ DSDNSIASVW 300
  301 LKSKWNLKPD AFTLPLPILL LDSIPKPIFD TFPKQIAAWR NKAARD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 3.30103 Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
    2 View Details [211..346] MSA 1.341996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle