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Protein Overview: gi|109510916, gi...

General Information:
Name(s) found: gi|109511981 [NCBI NR]
gi|109510916 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|109511981|ref|XP_001060292.1| PREDICTED: similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 kDa component) (ARC240) (CAG [NCBI NR]
  • gi|109510916|ref|XP_001054608.1| PREDICTED: similar to Mediator of RNA polymerase II transcription subunit 12 (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 kDa component) (ARC240) (CAG [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 2169 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    centrosome [UNKNOWN]
    mediator complex [UNKNOWN][IEA]
    nucleolus [UNKNOWN]
    Biological Process: steroid hormone receptor signaling pathway [UNKNOWN]
    negative regulation of Wnt receptor signaling pathway [UNKNOWN]
    androgen receptor signaling pathway [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    transcription initiation from RNA polymerase II promoter [UNKNOWN]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: protein domain specific binding [UNKNOWN]
    transcription cofactor activity [UNKNOWN]
    transcription coactivator activity [UNKNOWN]
    protein C-terminus binding [UNKNOWN]
    transcription activator activity [UNKNOWN]
    receptor activity [UNKNOWN]
    RNA polymerase II transcription mediator activity [UNKNOWN][IEA]
    thyroid hormone receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFGILSYE HRPLKRLRLG PPDVYPQDPK QKEDELTALN VKQGFNNQPA VSGDEHGSAK  60
   61 NVNFNPAKIS SNFSSIIAEK LRCNTLSDTG RRKSLMNQKD NFWLVTARSQ SAINTWFTDL 120
  121 AGTKPLTHLA KKVPIFSKKE EVFGYLAKYT VPVMRAAWLI KMTCAYYAAM SETKVKKKNT 180
  181 ADPFTEWTQI ITKYLWEQLQ KMAEYYRPGP AGSGVCGSAI GPLPHDVEMA IRQWDYNEKL 240
  241 ALFMFQDGML DRHEFLTWVL ECFEKIRPGE DELLKLLLPL LLRYSGEFVQ SAYLSRRLAY 300
  301 FCTRRLALQL DGVNSHSSHV ISAQSTSSLP TTPAPQPPTS NTPSTPFSDL LMCPQHRPLV 360
  361 FGLSCILQTI LLCCPSALVW HYSLTDSRIK TGSPLDHLPI APSNLPMPEG NSAFTQQVRA 420
  421 KLREIEQQIK ERGQAVEVRW SFDKCQEATA GFTIGRVLHT LEVLDSHSFE RSDFSNSLDS 480
  481 LCNRIFGLGP SKDGHEISSD DDAVVSLLCE WAVSCKRSGR HRAMVVAKLL EKRQAEIEAE 540
  541 RCGESEAADE KGSVASGSLS APSAPIFQDV LLQFLDTQAP MLTDPRSESE RVEFFNLVLL 600
  601 FCELIRHDVF SHNMYTCTLI SRGDLAFGTP GPRPPSPFDD PADDPERKEA EGSSSSKLED 660
  661 PGLSESMDID PSSSVLFEDM EKPDFSLFSP TMPCEGKGSP SPEKPDVEKD VKPPPKEKIE 720
  721 GTLGILYDQP RHVQYATHFP IPQEESCSHE CNQRLVVLFG VGKQRDDARH AIKKITKDIL 780
  781 KVLNRKGTAE TDQLAPIVPL NPGDLTFLGG EDGQKRRRNR PEAFPTAEDI FAKFQHLSHY 840
  841 DQHQVTAQVS RNVLEQITSF ALGMSYHLPL VQHVQFVFDL MEYSLSISGL IDFAIQLLNE 900
  901 LSVVEAELLL KSSDLVGSYT TSLCLCIVAV LRHYHACLIL NQDQMAQVFE GLCGVVKHGM 960
  961 NRSDGSSAER CILAYLYDLY TSCSHLKSKF GELFSDFCSK VKNTIYCNVE PSESNMRWAP1020
 1021 EFMIDTLENP AAHTFTYTGL GKSLSENPAN RYSFVCNALM HVCVGHHDPD RVNDIAILCA1080
 1081 ELTGYCKSLS AEWLGVLKAL CCSSNNGTCG FNDLLCNVDV SDLSFHDSLA TFVAILIARQ1140
 1141 CLLLEDLIRC AAIPSLLNAA CSEQDSEPGA RLTCRILLHL FKTPQLNPCQ SDGNKPTVGI1200
 1201 RSSCDRHLLA ASQNRIVDGA VFAVLKAVFV LGDAELKGSG FTVPGGTEEL PEEEGGGGSS1260
 1261 GRRQGGRNIS VETASLDVYA KYVLRSICQQ EWVGERCLKS LCEDSNDLQD PVLSSAQAQR1320
 1321 LMQLICYPHR LLDSEDGENP QRQRIKRILK NLDQWTMRQS SLELQLMIKQ TPNTEMNSLL1380
 1381 ENIAKATIEV FQQSAETGSS SGSTASNMPS SSKAKPVLSS LERSGVWLVA PLIAKLPTSV1440
 1441 QGHVLKAAGE ELEKGQHLGS SSRKERDRQK QKSMSLLSQQ PFLSLVLTCL KGQDEQREGL1500
 1501 LASLHSQVHQ IVINWRENQY LDDCKPKQLM HEALKLRLNL VGGMFDTVQR STQQTTEWAQ1560
 1561 LLLEIIISGT VDMQSNNELF TTVLDMLSVL INGTLAADMS SISQGSMEEN KRAYMNLVKK1620
 1621 LQKDLGERQS DSLEKVHQLL PLPKQNRDVI TCEPQGSLID TKGNKIAGFD SIFKKEGLQV1680
 1681 STKQKISPWE LFEGLKPSTA PLSWAWFGTV RVDRRVARGE EQQRLLLYHT HLRPRPRAYY1740
 1741 LEPLPLPPED EEPPAPALLE PEKKAPEPPK TDKPGTAPPS TEERKKKSTK GKKRSQPATK1800
 1801 SEDYGMGPGR SGPYGVTVPP DLLHHANPGS ISHLSYRQSS MGLYTQNQPL PAGGPRVDPY1860
 1861 RPVRLPMQKL PTRPTYPGVL PTTMTTVMGL EPSSYKTSVY RQQQPTVPQG QRLRQQLQQS1920
 1921 QGMLGQSSVH QMTPSSSYGL QSSQISPPSL QGYTSYVSHV GLQQHTGPAD PTRHLQQRPS1980
 1981 GYVHQQAPTY GHGLTSTQRF SHQTLQQTPM MGTMTPLSAQ GVQAGVRSTS ILPEQQQQQQ2040
 2041 QQQQQQQQQQ QQQQQQQQQQ QQQQQQYHIR QQQQQQQILR QQQQQQQQQQ QQQQQQQQQQ2100
 2101 QQQPQQQQPH QQQQQAAPPQ PQPQSQPQFQ RQGLQQTQQQ QQTAALVRQL QQQLSNTQPQ2160
 2161 PSTNIFGRY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle