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Protein Overview: gi|109496592

General Information:
Name(s) found: gi|109496592 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|109496592|ref|XP_001071336.1| PREDICTED: similar to Transformation/transcription domain-associated protein (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 3831 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    transcription factor complex [UNKNOWN]
    NuA4 histone acetyltransferase complex [UNKNOWN]
    STAGA complex [UNKNOWN]
    transcription factor TFTC complex [UNKNOWN]
    Biological Process: histone H4 acetylation [UNKNOWN]
    mitotic cell cycle checkpoint [UNKNOWN]
    histone H2A acetylation [UNKNOWN]
    regulation of transcription [UNKNOWN]
    histone deubiquitination [UNKNOWN]
    Molecular Function: transcription cofactor activity [UNKNOWN]
    protein binding [UNKNOWN]
    transcription coactivator activity [UNKNOWN]
    binding [IEA]
    phosphotransferase activity, alcohol group as acceptor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVATQGAT VVDQTTLMKK YLQFVAALTD VNTPDETKLK MMQEVSENFE NVTSSPQYST  60
   61 FLEHIIPRFL TFLQDGEVQF LQEKPAQQLR KLVLEILHRI PTNEHLRPHT KNVLSVMFRF 120
  121 LETENEENVL ICLRIIIELH KQFRPPITQE IHHFLDFVKQ IYKELPKVVN RYFENPQGIP 180
  181 ENTVPPPEMV GMITTVAVKV NPEREDSETR THSIIPRGSL SLKVLAELPI IVVLMYQLYK 240
  241 LNIHNVVAEF VPLIMNTIAI QVSAQARQHK LYNKELYADF IAAQIKTLSF LAYIIRIYQE 300
  301 LVTKYSQQMV KGMLQLLSNC PAETAHLRKE LLIAAKHILT TELRNQFIPC MDKLFDESIL 360
  361 IGSGYTARET LRPLAYSTLA DLVHHVRQHL PLSDLSLAVQ LFAKNIDDES LPSSIQTMSC 420
  421 KLLLNLVDCI RSKSEQESGN GRDVLMRMLE VFVLKFHTIA RYQLSAIFKK CKPQSELGAA 480
  481 EAALPGVPTA PAAPGPAPSP APVPAPPTPS TSSPSPSHPS NPRPRAPIXE ARRKGQGGXA 540
  541 DVSGHRLSES GENPGLRGQD HHVGHNVVXS SWXSSVYSXQ AAATQRNSDL YQACEVRHAG 600
  601 LGHLSGPDRR KRTNIHSSGQ LPDGEDEGRE GGAGALRGGL HHDEPTNVQG DLPDYSPLHG 660
  661 RKDLKKLRSS DCCQLLLGKS YYFCPVRYNP GGVPSGATAR NGLQCGAIQL VPQTVQVGLR 720
  721 LSVPVCSXEX ADAEASPAQD REQLHGTGAD RQGALQLLPP APGSLPLHRR RQPXPPVSGV 780
  781 SASPSKSPPR TEHVAERPAX AAHEGPLCRA VSHGTSAAEL SPALSAHVDG SLGVCPQWVS 840
  841 DIGQPRPEDL GVVCGQPATR FPLXPHSACA CRAHAGSVAH TAQPCRXHLP RGLPCAGEVR 900
  901 RQQPEDVEGV AEAALCCDXS SRPQHYCGVL XLQSVSPASN GKGHXDRPGL LEKCQHRALL 960
  961 PEAGLGGDQV LPGGHDEPGG QQARALPAAG TPXLYRKDHS QCHHIAPLQS SGHSSTEDVX1020
 1021 TGSDWGIHVC SHQRPATQCP ALCGQLDPPL HHGSGGPAVW SILATLLPGG QPAQHGHVPQ1080
 1081 XRKWVQRDGP LGPHXCNSYL YGLXRKGTVQ NWGGSPGCDI RCGKHHPGLK REGVPAAPLL1140
 1141 LHCGAPVCLL LXAGLVCQTG RCGLHXVPHG AASTHVGSPE PADIPQSSAL CYDGPDWRGF1200
 1201 QWGSRHGEDH AGATPDEMCN AFEGXGESRR DCGGSGEVFP PCDPRFGSXS DLSKLDCEKA1260
 1261 GHAFASGPGP GHRKKCDSNY GTTXRGPSGH GPPKEAPAAP PACQRPDRPD GGQHVLHHAA1320
 1321 AAALHDGSQC GGAQGFLHRA TEFVXGXGFS SDQAALLQKS PIARALTDRS IKCSRCLQLP1380
 1381 APVQGENHRC SLQSPQLHQQ XAAGGRGGLH EEVFGRCHHR SRSDSYAHAA FADDAGRLPE1440
 1441 LNAECRESAN LCYSPLSKFL QXXVLXSDDA TSAQVDGSGG HHPQRGPEEX RKXNEDLLGN1500
 1501 YKPFPPDPSC SSNAGQTFVG GRNEDRARHA DXGGQSIQRA PYQVPDAASL ADSGAVHDGS1560
 1561 DAEXPPVEPN VHEFLKTQRC QTSEGCVGSK PQQVHHSAAA WRCTDSSSPR LTQYQXHAPG1620
 1621 PPVPGHQDHK HHSXKRXCVA GXSALSSEPV EASVGKRDLS RKTPQREHGR HQLEGAQASG1680
 1681 LLSAELLQEE LWRHRAALPA TPSLHWSLPV QHDLLEGVYG RRDPQKLQHC SEAGTLLPLR1740
 1741 RVQRPQLWRX TESKGSAAHP ESCFLVQLXE GGRRAALRTS XSRGRQPGEH HQCVYNQGPG1800
 1801 PXETSXHARL PAHLPPAVRH AAGGACPPPH PRQQQEPQQQ AAPSHDLCVA LSALQGLRGP1860
 1861 GLQVQRAPAA GAHHRQVRHP QENRPAGFPQ SSQGSRNGSP SDCETSNGHF DPSGTSPHGG1920
 1921 WTPDADPLDX EDHRGGGAYS PTAGAHSSPH SAALXGVLPG AAPLGTAHGQ CHAEAGLHTQ1980
 1981 CHHXAEEAGC GPLRGCHQVG TAEDQGPAAG FXHGPKFWWR GRQLGVHXEG PVCRLCAGGE2040
 2041 TLQGGHRSHQ RSVWEEPVTA RSXLSSCQTH XQAAYRHRGE LPHSSGLPGE XQHQHSRVPW2100
 2101 RGAFSTLCES PQDRSTARYV VQVGAQTAVV XQAADDCGAA XPGELWEYLH GIGSTELLAN2160
 2161 CAAVSGHPQX LQAPTAGHCS LHDLWQHQSA ASCAQPPLPT DEHFPYRAEH FERGLQVXRA2220
 2221 GVPLCSCGEG HLRRPHXLRE GHQRQPLPAL RDTYDPQVGL LQQPELHRQA HLRLHALPTE2280
 2281 DGPRASEPTG SIREHRSNRS WSKRAGDAEP GPREDSSGGD EHGDAEELHP DHPDVPHREV2340
 2341 PRCQDPPSCG EDCGGMGXEX FPDGSQSDAY TPGEVNLARE NDDLHRETLS GRPXTKCPVF2400
 2401 GPCXLCVQGX GTLRQXADCK AXARLSLWAA LRPAIDQGQV FXGFXQLYET PCLXASVVRH2460
 2461 LFPELGGHGE PFLDQAVHXA PPGGVREEHS HWNQLPGSHA SLHYQCHQPG RQPXPGCLCH2520
 2521 GHSCQAGASG TREQXVXRRG RGDXYXAGPW XPDQHTQNQR AFXEGHWKPA THAYQQTXQI2580
 2581 SRYSPGSEDR GTAQCLRSAL PHFHNVGXED LGPAFPKAVE NPLXQTAACS GGGDQPFPVQ2640
 2641 RQSSGAARLS AERFELLRGS HVPVRPPDPH ATLCAEVPGK DSQPLVPFHV DAGAPGFREG2700
 2701 AEPANQTEAD SRVLXAGKHN TASAGDTGFP RGTLLSATRR GHVGWPMAEA MQVLRDGHRH2760
 2761 CLXAARLLXA GPRILRKGNG QSXKRAXAEQ CLPRHLPXVP AVGGPLDXVL QGAEPVGSLD2820
 2821 XVWPVXRSHK SLPGPGVCVE GVQLDRHEGG AGAGGGQLSQ GDGLEGXHVP GLPGHLPSRG2880
 2881 AAAQLHXAPG GDGQQPGHPR VAAAAPCGVS RAYTSSAGCP ADHRASGSCA DKCGPAADQP2940
 2941 GQEQQPPRHE DGGEDLEEPA AHRVXRLVAL EQRLYVAAAP LPGYCNCIXK XLSPRPELQX3000
 3001 CHAGCPCLRL CYHPVWEDRP ETGSGXCGAG YTEPHSHHPY CAHRGLLPED SAASEVLPPA3060
 3061 GGSDGQEXVH AGPGGYXVHK PKILHKGDDS XVLRPEGDVP GSDQQIXGGQ QSILGSCADA3120
 3121 XRAGEGLGHV GGLPGEHLRE GAAAAPGRVR HHLLPARVPP SEREQVKEVL GQGAVASEFR3180
 3181 RXQKYAGRCC GQVLHWRTPH PVAGVDPTAA HLPGGLRGQA AAEPYQPGWT SVSPSRLLSH3240
 3241 PDSVPDPENX AEGTLQEXSR AHKSNGAHVA LQPNHAHAEG APPHPPVLPG GHRRPDGLVQ3300
 3301 RELARRGAQA APAGPGKVLL CCLXKEWCCV RRQDYPSHSQ LCQEAGEHFR GRPGECVQRL3360
 3361 NHVLQRSLXV SGPTGTSHSP GSCLPEAKRP VHHRFRLQCP RIHEASXSDL XIEKVDQNPR3420
 3421 GXNQAASQIL PHRRKMSVLE QFLGSDSXSR DPWGVFDAQA NALLHXDCSL YAPSGDRAEA3480
 3481 QHSSPQALHP GAQWQDLPVP GHEXRLPHGV AQGGASAAAA ASAEPLPGEE EGDHQEALVL3540
 3541 HSSSGCGCVP SDAPRGRQPL FTFPRGDLQA ALRQERHXAR QPHLPLLXQA GHSTGTGDPG3600
 3601 QPPGPPRHSQ RGPKQHGAPQ HAEGVGPAHV SQRYRLLDLP EDVHHPVGPH RLCRVCPAPK3660
 3661 QTQPXDAADR SGHGQAECRL LPIXHKXCNW GLRCQPSSPF PPHAQHIXVP DHHWRLGPTD3720
 3721 GLHDCCLAVL RPAQLQGGWH SENCAPRXDH CLAQKDPGGH FLCPVGRRAA XEHGQPAAGL3780
 3781 LGSESCHCRH DPPAQLGPVR RWGEQGEHPG GCCQQPGQPV SHGPCLASVA V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle