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Protein Overview: gi|109495173

General Information:
Name(s) found: gi|109495173 [NCBI NR]
Description(s) found:
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  • gi|109495173|ref|XP_213706.4| PREDICTED: similar to transformation/transcription domain-associated protein [Rattus norvegicus] [NCBI NR]
  • PREDICTED: similar to transformation/transcription domain-associated protein [Rattus norvegicus] [nr-271106-contam.fasta]
    • Organism: Rattus norvegicus
    Length: 3831 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    transcription factor complex [UNKNOWN]
    NuA4 histone acetyltransferase complex [UNKNOWN]
    STAGA complex [UNKNOWN]
    transcription factor TFTC complex [UNKNOWN]
    Biological Process: histone H4 acetylation [UNKNOWN]
    mitotic cell cycle checkpoint [UNKNOWN]
    histone H2A acetylation [UNKNOWN]
    regulation of transcription [UNKNOWN]
    histone deubiquitination [UNKNOWN]
    Molecular Function: transcription cofactor activity [UNKNOWN]
    protein binding [UNKNOWN]
    transcription coactivator activity [UNKNOWN]
    binding [IEA]
    phosphotransferase activity, alcohol group as acceptor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVATQGAT VVDQTTLMKK YLQFVAALTD VNTPDETKLK MMQEVSENFE NVTSSPQYST  60
   61 FLEHIIPRFL TFLQDGEVQF LQEKPAQQLR KLVLEILHRI PTNEHLRPHT KNVLSVMFRF 120
  121 LETENEENVL ICLRIIIELH KQFRPPITQE IHHFLDFVKQ IYKELPKVVN RYFENPQGIP 180
  181 ENTVPPPEMV GMITTVAVKV NPEREDSETR THSIIPRGSL SLKVLAELPI IVVLMYQLYK 240
  241 LNIHNVVAEF VPLIMNTIAI QVSAQARQHK LYNKELYADF IAAQIKTLSF LAYIIRIYQE 300
  301 LVTKYSQQMV KGMLQLLSNC PAETAHLRKE LLIAAKHILT TELRNQFIPC MDKLFDESIL 360
  361 IGSGYTARET LRPLAYSTLA DLVHHVRQHL PLSDLSLAVQ LFAKNIDDES LPSSIQTMSC 420
  421 KLLLNLVDCI RSKSEQESGN GRDVLMRMLE VFVLKFHTIA RYQLSAIFKK CKPQSELGAA 480
  481 EAALPGVPTA PAAPGPAPSP APVPAPPPPP PPAPPAPATP VTPAPVPPFE KQGEKDKEDK 540
  541 QTFQVTDCRS LVKTLVCGVK TITWGITSCK APGEAQFIPN KQLQPKETQI YIKLVKYAMQ 600
  601 ALDIYQVQIA GNGQTYIRVA NCQTVRMKEE KEVLEHFAGV FTMMNPLTFK EIFQTTVPYM 660
  661 VERISKNYAL QIVANSFLAN PTTSALFATI LVEYLLERLP EMGSNVELSN LYLKLFKLVF 720
  721 GSVSLFAAEN EQMLKPHLHK IVNSSMELAQ TAKEPYNYFL LLRALFRSIG GGSHDLLYQE 780
  781 FLPLLPNLLQ GLNMLQSGLH KQHMKDLFVE LCLTVPVRLS SLLPYLPMLM DPLVSALNGS 840
  841 QTLVSQGLRT LELCVDNLQP DFLYDHIQPV RAELMQALWR TLRNPADSIS HVAYRVLGKF 900
  901 GGSNRKMLKE SQRLHYVVTE VQGPSITVEF SDCKASLQLP MEKAIETALD CLKSANTEPY 960
  961 YRRQAWEVIR CFLVAMMSLE DNKHALYQLL AHPNFTEKTI PSVIISHRYK AQDTPARKTF1020
 1021 EQALTGAFMS AVIKDLRPSA LPFVASLIRH YTMVAVAQQC GPFLLPCYQV GSQPSTAMFH1080
 1081 SEENGSKGMD PLVLIDAIAI CMAYEEKELC KIGEVALAVI FDVASIILGS KERACQLPLF1140
 1141 SYIVERLCAC CYEQAWYAKL GGVVSIKFLM ERLPLTWVLQ NQQTFLKALL FVMMDLTGEV1200
 1201 SNGAVAMAKT TLEQLLMRCA TPLKDEERAE EIVVAQEKSF HHVTHDLVRE VTSPNSTVRK1260
 1261 QAMHSLQVLA QVTGKSVTVI MEPHKEVLQD MVPPKKHLLR HQPANAQIGL MEGNTFCTTL1320
 1321 QPRLFTMDLN VVEHKVFYTE LLNLCEAEDS ALTKLPCYKS LPSLVPLRIA ALNALAACNY1380
 1381 LPQSREKIIA ALFKALNSTN SELQEAGEAC MRKFLEGATI EVDQIHTHMR PLLMMLGDYR1440
 1441 SLTLNVVNRL TSVTRLFPNS FNDKFCDQMM QHLRKWMEVV VITHKGGQRS DGNEMKICSA1500
 1501 IINLFHLIPA APQTLVKPLL EVVMKTERAM LIEAGSPFRE PLIKFLTRHP SQTVELFMME1560
 1561 ATLNDPQWSR MFMSFLKHKD ARPLRDVLAA NPNRFITLLL PGGAQTAVRP GSPSTSNMRL1620
 1621 DLQFQAIKII SIIVKNDDAW LANQHSLVSQ LRRVWVSETF QERHRKENMA ATNWKEPKLL1680
 1681 AFCLLNYCKR NYGDIELLFQ LLRAFTGRFL CNMTFLKEYM EEEIPKNYSI AQKRALFFRF1740
 1741 VEFNDPNFGD ELKAKVLQHI LNPAFLYSFE KGEGEQLLGP PNPEGDNPES ITSVFITKVL1800
 1801 DPEKQADMLD SLRIYLLQYA TLLVEHAPHH IHDNNKNRNS KLRRLMTFAW PCLLSKACVD1860
 1861 PACKYSGHLL LAHIIAKFAI HKKIVLQVFH SLLKAHAMEA RAIVRQAMAI LTPAVPARME1920
 1921 DGHQMLTHWT RKIIVEEGHT VPQLVHILHL IVQHFKVYYP VRHHLVQHMV SAMQRLGFTP1980
 1981 SVTIEQRRLA VDLSEVVIKW ELQRIKDQQP DSDMDPNSGG EGVNSVSIKR GLSVDSAQEV2040
 2041 KRFRAATGAI SAVFGRSQSL PGADSLLAKP IDKQHTDTVV NFLIRVACQV NDNTNTAGSP2100
 2101 GEVLSRRCVN LLKTALRPDM WCKSELKLQW FDKLLMTVEQ PNQVNYGNIC TGLEVLNFLL2160
 2161 TVLQSPAILS SFKPLQRGIA ACMTCGNTKV LRAVHSLLSR LMSIFPTEPS TSSVASKYEE2220
 2221 LECLYAAVGK VIYEGLTNYE KATSANPSQL FGTLMILKSA CCNNPSYIDR LISVFMRSLQ2280
 2281 KMVREHLNPQ AASGSTEATA AGASELVMLS LDLVKTRLAV MSMEMRKNFI QTILTSLIEK2340
 2341 SPDAKILRAV VKIVEEWVKN NSPMAANQTP TLREKSILLV KMMTYIEKRF PEDLELNAQF2400
 2401 LDLVNYVYRD EALSGSELTA KLEPAFLSGL RCAQPLIRAK FFEVFDNSMK RRVYERLLYV2460
 2461 TCSQNWEAMG SHFWIKQCIE LLLAVCEKST AIGTSCQGAM LPSITNVINL ADSHDRAAFA2520
 2521 MVTHVKQEPR ERENSESKEE DVEIDIELAP GDQTSTPKTK ELSEKDIGNQ LHMLTNRHDK2580
 2581 FLDTLREVKT GALLSAFVQL CHISTTLAEK TWVQLFPRLW KILSDRQQHA LAGEISPFLC2640
 2641 SGSHQVQRDC QPSALNCFVE AMSQCVPPIP MRPCVLKYLG KTHNLWFRST LMLEHQAFEK2700
 2701 GLSLPIKPKQ TAEFYEQESI TPPQQEILDS LAELYSLLQE EDMWAGLWQK RCKFSETATA2760
 2761 IAYEQHGFFE QAQESYEKAM DKAKKEHERS NASPAIFPEY QLWEDHWIRC SKELNQWEAL2820
 2821 TEFGQSKGHI NPYLVLECAW RVSNWTAMKE ALVQVEVSCP KEMAWRVNMY RGYLAICHPE2880
 2881 EQQLSFIERL VEMASSLAIR EWRRLPHVVS HVHTPLLQAA QQIIELQEAA QINAGLQPTN2940
 2941 LGRNNSLHDM KTVVKTWRNR LPIVSDDLSH WSSVFMWRQH HYQAIVTAYE NSSHHDPSSN3000
 3001 NAMLGVHASA SAIIQYGKIA RKQGLVNVAL DILSRIHTIP TVPIVDCFQK IRQQVKCYLQ3060
 3061 LAGVMGKNEC MQGLEVIEST NLKYFTKEMT AEFYALKGMF LAQINKSEEA NKAFSAAVQM3120
 3121 HDVLVKAWAM WGDYLESIFV KERQLHLGVS AITCYLHACR HQNESKSRKY LAKVLWLLSF3180
 3181 DDDKNTLADA VDKYCIGVPP IQWLAWIPQL LTCLVGSEGK LLLNLISQVG RVYPQAVYFP3240
 3241 IRTLYLTLKI EQRERYKSDP GPIRATAPMW RCSRIMHMQR ELHPTLLSSL EGIVDQMVWF3300
 3301 RENWHEEVLR QLQQGLAKCY SVAFEKSGAV SDAKITPHTL NFVKKLVSTF GVGLENVSNV3360
 3361 STMFSSAASE SLARRAQATA QDPVFQKLKG QFTTDFDFSV PGSMKLHNLI SKLKKWIKIL3420
 3421 EAKTKQLPKF FLIEEKCRFL SNFSAQTAEV EIPGEFLMPK PTHYYIKIAR FMPRVEIVQK3480
 3481 HNTAARRLYI RGHNGKIYPY LVMNDACLTE SRREERVLQL LRLLNPCLEK RKETTKRHLF3540
 3541 FTVPRVVAVS PQMRLVEDNP SSLSLVEIYK QRCAKKGIEH DNPISRYYDR LATVQARGTQ3600
 3601 ASHQVLRDIL KEVQSNMVPR SMLKEWALHT FPNATDYWTF RKMFTIQLAL IGFAEFVLHL3660
 3661 NRLNPEMLQI AQDTGKLNVA YFRFDINDAT GDLDANRPVP FRLTPNISEF LTTIGVSGPL3720
 3721 TASMIAVSRC FAQPNFKVDG ILKTVLRDEI IAWHKKTQED TSSALSAAGQ PENMDSQQLV3780
 3781 SLVQKAVTAV MTRLHNLAQF DGGESKVNTL VAAANSLDNL CRMDPAWHPW L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle