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Protein Overview: gi|109488732

General Information:
Name(s) found: gi|109488732 [NCBI NR]
Description(s) found:
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  • gi|109488732|ref|XP_220813.4| PREDICTED: similar to Thyroid hormone receptor-associated protein complex 240 kDa component (Trap240) (Thyroid hormone receptor-associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 2 [NCBI NR]
  • PREDICTED: similar to Thyroid hormone receptor-associated protein complex 240 kDa component (Trap240) (Thyroid hormone receptor-associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofac [nr-271106-contam.fasta]
    • Organism: Rattus norvegicus
    Length: 2155 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    mediator complex [UNKNOWN][IEA]
    Biological Process: steroid hormone receptor signaling pathway [UNKNOWN]
    androgen receptor signaling pathway [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    transcription initiation from RNA polymerase II promoter [UNKNOWN]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: transcription cofactor activity [UNKNOWN]
    transcription coactivator activity [UNKNOWN]
    transcription activator activity [UNKNOWN]
    receptor activity [UNKNOWN]
    RNA polymerase II transcription mediator activity [UNKNOWN][IEA]
    thyroid hormone receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQHKTADLT GIKWKRYVWQ GPTSAPILFP VTEEDPILSS FSRCLKADVL GVWRRDQRPG  60
   61 RRELWIFWWG KDPNFADLIH HDLSEEEDGV WENGLSYECR TLLFKAVHNL LERCLMNRNF 120
  121 VRIGKWFVKP YEKDEKPINK SEHLSCSFTF FLHGDSNVCT SVEINQHQPV YLLSEEHVTL 180
  181 AQQSNSPFQV ILSPFGLNGT LTGQAFKMSD SATKKLIGEW KQFYPISCGL KEMSEEKQED 240
  241 MDWEDDSLAA VEVLVAGVRM IYPACFVLVP QSDIPTPSSV GSSHCSASCL GIHQVPASTR 300
  301 DPAMSSVTLT PPTSPEEVQS VDPQSAQKWV KFSSVSDGFS TDSTSHHGGK IPRKLANHVV 360
  361 DRVWQECNMN RLQNKRKYSA TSSGLCEEET ADKIGSWDFV EATQRTSCSC LRHKSLKTRN 420
  421 TGQQGQAPSL GQQQQILPKH KTNEKQEKSE KPQKRPLTPF HHRVSISDDI GMDTDSASQR 480
  481 LVISAADSQV RFTNIRTNDV AKTPQMHGTE LANSPQPPPL SPHPCDVVDE GVTKTPSTPQ 540
  541 SQHFYQMPTP DPLVPTKPME DRIDSLSQSF PPPFQEAVEP TVYVGTAVSL EEDEANVAWK 600
  601 YYKVPKKKDV EFLPPQLPND KFKDDPVGPF GQESVTSVTE LMVQCKKPLK VSDEIVQQYQ 660
  661 IKNQYLSAIA SDTEQEPKID PYAFVEGDEE FIFTDKKDRQ NSEREAGKKH KVEDGTSAVT 720
  721 VLSHEEDAMS LFSPSKQDAP RPANHARPPS TSLIYDSDLA VSYTDLDNLF NSDEDELTPG 780
  781 SKKSASGSDD KASSKESKTG SLDPLSCIST ADLHKMYPTP PSLEQHIMGF SPMNMNNKEY 840
  841 GSMDPTPGGT VLEGSSSSVG TQFRIEVEEG FCSPKPSEIK DFSYVYKPEN CQVLVGCSMF 900
  901 APLKTLPSHC LPPIKLPEEC VYRQSWTVGK LDLLPSGPSM PFIKEGDGSN LDQDYGPAYT 960
  961 PQIHTSFGMP PSSAPPSNGG AGILPSPSTP RFPTPRTPRT PRTPRGAGGP ASAQGSVKYE1020
 1021 NSDLYSPAST PSTCRPLNSV EPATVPSIPE AHSLYVNLIL SESVMNLFKD CNFDSCCICV1080
 1081 CNMNIKGADV GVYIPDPTQE AQYRCTCGFS AVMNRKFGNN SGLFLEDELD IIGRNTDCGK1140
 1141 EAEKRFEALR ASSVENVNGS LKESEKVPDE LILLLQDQCT NLFSPFGAAD HDPFPKAGIS1200
 1201 SNWVRVEERD CCSDCCLALE HGRQFMDNMS GGKVDEALVR SSCLHPWAKQ NDASVQCSQD1260
 1261 ILRMLLSLQP VLQDAIQKKR TVRPWGVQGP LTWQQFHKMA GRGSYGTDES PEPLPIPTFL1320
 1321 LGYDYDFLVL SPFALPYWEK LMLEPYGSQR DIAYVVLCPE NEALLNGARS FFRDLTAIYE1380
 1381 SCRLGQHRPI SRLLTDGIMK VGATASKKLS EKFVTEWFSQ AADGNNEAFS KLKLYAQVCR1440
 1441 YDLGPYLASQ PLDSSLLSQP NLVAPPNQSL VTAPQMTNTG NANAPSATLA SAASSTMTLT1500
 1501 PGVAISTSVA TANSTLTTTS SSSSSSMSSG VSSNKLPSFP PFGSMNTSGT GSMSAQGSTV1560
 1561 QSGQLGGQQS SSLQAAGISG ESASLPTQPH PDVSESTMDR DKVGIPTDGD SHAITYPPAI1620
 1621 VVYIIDPFTY ENKDESTSSS NVWTLGLLRC FLEMLQTLPP HIKSTVSVQI VPCQYLLQPV1680
 1681 KHDDRQIYSQ HLKSLAFSAF TQCRRPLPTS TNVKTLTGFG PGLAMETALK SPDRPECIRL1740
 1741 YTPPFILAPV KDKQTELGET FGEAGQKYNV LFVGYCLSHD QRWILASCTD LYGELLETCI1800
 1801 INIDVPNRAR RKKGSARRFG LQKLWEWCLG LVQMSSLPWR VVIGRLGRIG HGELKDWSCL1860
 1861 LSRRNLQSLS KRLKDMCRMC GISAADSPSI LSACLVAMEP QGSFVIMPDS VSTGSVFGRS1920
 1921 TTLNMQTPQL NTPQDTSCTH ILVFPTSASV QVASATYTTE NLDLAFNPNN DGADGMGIFD1980
 1981 LLDTGDDLDP DIINILPASP TTSPVHSPGS HYPHGGDAGK GQGTDRLLST ESHDEVTNIL2040
 2041 QQPLALGYFV STAKAGPLPD WFWSACPQAQ YQCPLFLKAS LHLHVPSVQS DELLHSKHSH2100
 2101 PLDSNQTSDV LRFVLEQYNA LSWLTCDPAI QDRRSCLPIH FVVLNQLYNF IMNML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle