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Protein Overview: gi|109486468

General Information:
Name(s) found: gi|109486468 [NCBI NR]
Description(s) found:
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  • gi|109486468|ref|XP_237536.4| PREDICTED: similar to Laminin alpha-1 chain precursor (Laminin A chain) [Rattus norvegicus] [NCBI NR]
  • PREDICTED: similar to Laminin alpha-1 chain precursor (Laminin A chain) [Rattus norvegicus] [nr-271106-contam.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=Lama1 [011711_HMR.fasta]
  • Laminin, alpha 1 OS=Rattus norvegicus GN=Lama1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Laminin, alpha 1 OS=Rattus norvegicus GN=Lama1 [120808_122_R_norvegicus.fasta]
    • Organism: Rattus norvegicus
    Length: 3083 amino acids

    Gene Ontology:
    Cellular Component: basement membrane [UNKNOWN][IEA]
    extracellular space [UNKNOWN]
    laminin-1 complex [UNKNOWN][IEA]
    laminin-3 complex [UNKNOWN]
    extracellular matrix [UNKNOWN][IEA]
    cellular_component [ND]
    proteinaceous extracellular matrix [UNKNOWN]
    Biological Process: biological_process [ND]
    branching involved in lung morphogenesis [UNKNOWN]
    neuron projection development [UNKNOWN]
    establishment of epithelial cell apical/basal polarity [UNKNOWN]
    regulation of embryonic development [IEA]
    cell surface receptor linked signaling pathway [UNKNOWN]
    regulation of cell adhesion [IEA]
    morphogenesis of an epithelial sheet [UNKNOWN]
    regulation of cell migration [IEA]
    branching involved in salivary gland morphogenesis [UNKNOWN]
    tissue development [UNKNOWN]
    Molecular Function: glycosphingolipid binding [UNKNOWN]
    protein binding [UNKNOWN]
    receptor binding [IEA]
    extracellular matrix structural constituent [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSGTGVAL LVLLASVLWV TVRSQQRGLF PAILNLATNA HISANATCGE KGPEMFCKLV  60
   61 EHVPGRPVRH AQCRVCDGNS TNPRERHPIT HAIDGTNNWW QSPSIQNGRE YHWVTVTLDL 120
  121 RQVFQVAYVI IKAANAPRPG NWILERSVDG VKFRPWQYYA VSDTECLTRY KITPRRGPPT 180
  181 YRADNEVICT SYYSKLVPLE HGEIHTSLIN GRPSADDPSP QLLEFTSARY IRLRLQRIRT 240
  241 LNADLMTLSH RDLRDLDPIV TRRYYYSIKD ISVGGMCICS GHASSCPWDE EAKQLQCQCE 300
  301 HNTCGESCDR CCPGFHQQPW RPGTISSSNQ CEECNCHNKA KDCYYDNNVA KERKSLNTAG 360
  361 QYSGGGVCIN CLQNTTGINC ETCIDQYYRP HKVSPYEDQP CRPCDCDPVG SLSSVCIKDD 420
  421 LHADLANGKW PGQCPCRKGY AGDKCDRCQF GYRGFPNCVP CDCSTVGSVN EDPCTEPCLC 480
  481 KKNVEGENCD RCKPGFYNLK ERNPEGCSEC FCFGVSDVCD SLTWSVSQVT NMSGWLVTDL 540
  541 ISPNKIRSQQ DALGRHRQIS INNTAVMHRF TSPYYWAAPE AYLGNKLTAF GGFLKYTVSY 600
  601 DIPVETVDSN LMSHADVIIK GNGLTISTRA EGLSLQPYEE YFNVVRLVPE NFRDFNTRRE 660
  661 IDRDQLMTVL ANVTHLLIRA NYNSAKMALY RLDSVSLDIA SPNAIDLVVA ADVEHCECPQ 720
  721 GYTGTSCEAC LPGYYRVDGI LFGGICQPCE CHGHSSECDI HGICSGCTHN TTGDHCEQCL 780
  781 PGFYGTPSRG TPGDCQPCAC PLSIDSNNFS PTCHLTDREE VVCDQCAPGY SGAWCERCAD 840
  841 GYYGNPTVPG GTCVPCNCSG NVDPLEAGHC DSVTGECLKC LWNTDGAHCE RCADGFYGDA 900
  901 VTAKNCRACN CHENGSLSGI CHLETGLCDC KPYVTGQQCD QCLPGYYGLD TGLGCVPCNC 960
  961 SGEGSISDNC TEEGQCHCVP GVSGKQCDQC SHGFYAFQNG GCTPCDCAHT QNNCDPDSGE1020
 1021 CLCPPHTHGL KCEQCEEAFW GLDPEQGCQA CNCSVVGSTS PQCDVLSGQC SCKEGFGGQS1080
 1081 CHQCSLGYRS FPDCVPCDCD LRGTLADTCD LEQGLCSCTE DSGTCSCKEN VLGPQCDKCR1140
 1141 AGTFALRADN PLGCSPCFCF GLSQLCSELE GYVRAPITLA SDQPILHVVS QSNLKGTTEG1200
 1201 VHFQPPDTLL DAEAVRQHIY AEPFYWRLPK QFQGDQLLAY GGKLQYTVAF YSTLGTGTSN1260
 1261 YEPQVLIKGG RTRKHIIYMD APAPENGVRQ DYEVGMKEEF WKYFNSVSEK HVTHSDFMSV1320
 1321 LSNIEYILIK ASYGQGLQQS RIANISMEVG RKAVEPAPEG KVALQLELCV CPPGTAGHSC1380
 1381 QDCAPGYHRG KLPESSGRGP RPLLAPCVPC NCNNHSDVCD PETGKCLNCR DHTAGDHCEL1440
 1441 CTAGYYGKVI GLPGDCTPCT CPHHPPFSFS PTCVLEGDSG FWCDACLPGY EGQYCERCSA1500
 1501 GYHGNPRAAG GSCQKCDCNP QGSVHSDCDR ASGQCVCKPG ATGLHCEECL PRHILMESHC1560
 1561 VSCDDECVGA LLNDLDSIGD AVLSLNLAGV SLAPYGTLEN LENTTKYFQG YLLEENAKKV1620
 1621 QAEIQLGGIE EQTENLQKEL ARVLRSHQQV NTAMERTSNR SQALATFLEQ LHRNIKEITE1680
 1681 KVATLNQTTG EDFQPPVSAL QSLHQNISSL LALIKKRNFT EMRQNATLEL KAAKDLLSRI1740
 1741 QKRFQKPQEK LKALKEASSL LSNHIADLQA AEELLREAGS KTQESSLLLL LVKANLKDFR1800
 1801 EKKLHVQEEQ NLTSKLIAQG REWVDAARTH AAAAQDTLTQ LEHHRDELLL WASKIRSHVD1860
 1861 DLVMQMSKRR ARDLVHRAEQ HASELQSAAE ALDRDLENVR NVSLNATSAV HVHTNIQTLT1920
 1921 EEAESLAADA HKTANKTSLI SESLAPRGKA VLQRSSRFVK ESVSTRKKQQ GITLKLDELK1980
 1981 NLTSQFQERV DNITRQANDS LTVLRESPGG MREKSRKVKE LAVAANETAA RTLEDMLGLS2040
 2041 LRVFNTSEDL SRVNATVQET KDLLHNSTMT TILAGRKMRD MEMQANLLFD RLKPLKMLEE2100
 2101 NLSRNLSEIK LLISRARKQA ASIKVAVSAD RDCIRAYQPQ ISSTNYNTLL LNVKTQEPDN2160
 2161 LLFYLGSSSS SDFLAVEMRR GKAAFLWDLG SGSTRLEFPD VSINNDKWHS IYITRFGNMG2220
 2221 SLSVKEASAA EDPPVRTSKS PGLANVLDIN NSTLMFVGGL GGQIKKSPAV KVTHFKGCMG2280
 2281 EAFLNGKSIG LWNYIEREGK CNGCFGSSQN EDASFHFDGS GYAVVEKALR PTVTQIIILF2340
 2341 STFSPNGLLF YLASNGTKDF LSIELLRGRV KVMVDLGSGP LTLMTDRRYN NGTWYKIAFQ2400
 2401 RNRKQGLLAV FDAYDTSDKE TKQGETPGAA SDLNRLEKDL IYVGGLPHSK AVRKGVSSRS2460
 2461 YVGCIKNLEI SRSTFDLLRN SYGVRKGCTL EPIQSVSFLK GGYMEMPPKS LSPESSLLAT2520
 2521 FATKNSSGVI LAALGKDAEK AGASQAHVPF FSILLIEGRI EVHINSGDGT SLRKALLHAP2580
 2581 TGSYSDGQEH SISVVRNRRV ITVQLDENSP VEMKLGPLTE GRTINISNLY IGGLPEGKGT2640
 2641 PMIRMRTSFH GCIKNVVIDA QLLDFTRAAG SEQVELDTCL LAEEPTQGLH REHGELPPEP2700
 2701 PTLPEPELCA VDTAPGYVAG AHQFGLSQNS HLVLPFNQSD VRKRLQVQLN IRTFASSGLI2760
 2761 YYVAHQNQMD YAVLQLHEGR LNFMFDLGKG RTKVSHPALL SDGKWHTVKT EYIKRKAFMT2820
 2821 VDGQESPSVT VVGNATTLDV ERKLYLGGLP AHYRARSIGT ITHSIPACIG DVTVNSQQLD2880
 2881 KDRPASAFAV DRCYAVAQEG TFFEGSGYAA LVKEGYKVRL DLNITLEFRT SSKNGVLLGI2940
 2941 SSAKVDAIGL EIVDGKVSFH VNNGAGRITA TYKPRATRTL CDGKWHTLHA HKSRHRIVLT3000
 3001 VDGDAVRAES PHTHSTSADT NDPIYVGGYP AHVKQNCLSS RASFRGCVRN LELSRGSQVQ3060
 3061 SLDLSRAFDL HGVFPHSCPG PEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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