Protein Overview: gi|109480098

General Information:
Name(s) found:	gi\|109480098 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|109480098\|ref\|XP_001055673.1\| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b isoform 2 [Rattus norvegicus] [NCBI NR] PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b isoform 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=LOC685179 similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform b isoform 2 [rat-ipi-250309-contam.fasta] Uncharacterized protein OS=Rattus norvegicus GN=Smarcc2 [011711_HMR.fasta] Uncharacterized protein OS=Rattus norvegicus GN=Smarcc2 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Smarcc2 OS=Rattus norvegicus GN=Smarcc2 PE=4 SV=1 [Aridor_1205.fasta] Protein Smarcc2 OS=Rattus norvegicus GN=Smarcc2 PE=1 SV=3 [RAT.fasta.20160308]
Organism:	Rattus norvegicus
Length:	1135 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] SWI/SNF complex [UNKNOWN] transcriptional repressor complex [UNKNOWN] [NOT]nucleolus [UNKNOWN] chromatin [IEA] intracellular [IEA]
Biological Process:	chromatin remodeling [UNKNOWN] negative regulation of transcription, DNA-dependent [UNKNOWN] positive regulation of transcription, DNA-dependent [UNKNOWN] chromatin assembly or disassembly [IEA]
Molecular Function:	DNA binding [IEA] protein binding [UNKNOWN] chromatin binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ  60
   61 EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN 120
  121 VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDIV KRHQGTISED KSNASHVVYP 180
  181 APGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK 240
  241 WILDTDTFNE WMNEEDYEVS DDKSPVSRRK KISAKTLTDE VNSPDADRRD KKGGNYKKRK 300
  301 RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT 360
  361 VNTKKDSESA PVKGGTMTDL DEQDDESMET TGKDEDENST GNKGEQTKSA DLHEDNVTEQ 420
  421 THHIIVPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY 480
  481 LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG 540
  541 LVPLQPKPPQ GRQVDADTKA GRKGKELDDL VPEAAKGKPE LQGSASQQML NFPDKGKEKP 600
  601 ADMQNFGLRT DMYTKKNIPS KSKAAASATR EWTEQETLLL LEALEMYKDD WNKVSEHVGS 660
  661 RTQDECILHF LRLPIEDPYL EDSEASLGPL AYQPIPFSQS GNPVMSTVAF LASVVDPRVA 720
  721 SAAAKSALEE FSKMKEEVPT ALVEAHVRKV EEAAKVTGKA DPAFGLESSG IAGTASDEPE 780
  781 RIEESGTEEA RAESQAADEK KEPKEPREGG GAVEEEAKEE ISEAPKKDEE KGKEADSEKE 840
  841 SEKSDGDPIV DPEKDKEPTE GQEEGLKEVA EPEGERKAKV ERDIGEGNLS TAAAAALAAA 900
  901 AVKAKHLAAV EERKIKSLVA LLVETQMKKL EIKLRHFEEL ETIMDREREA LEYQRQQLLA 960
  961 DRQAFHMEQL KYAEMRARQQ HFQQMQQQPP PPPPPPPPPA LPPGSQPIPP TGAAAPATVH1020
 1021 GLAVAPASVA SAPPGGGAPP GTLGPSEQIG QAGTTAGPQQ PQQAGAPQPG AVPPGVPPPG1080
 1081 PHGPSPFPNQ QTPPSMMPGA VPGSGHPGVA DPGTPLPPDP TAPSPGTVTP VPPPQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: gi|109480098

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: