Protein Overview: gi|149023423, gi...

General Information:
Name(s) found:	gi\|157817891 [NCBI NR] gi\|149023423 [NCBI NR] gi\|109470891 [NCBI NR] gi\|109468897 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|157817891\|ref\|NP_001099987.1\| serine palmitoyltransferase, long chain base subunit 3 [Rattus norvegicus] [NCBI NR] gi\|149023423\|gb\|EDL80317.1\| similar to RIKEN cDNA C130053K05 gene; similar to dJ718P11.1.1 (novel class II aminotransferase similar to serine palmotyltransferase (isoform 1)) (predicted) [Rattus norvegicus] [NCBI NR] gi\|109470891\|ref\|XP_001081310.1\| PREDICTED: similar to serine palmitoyltransferase, long chain base subunit 2 [Rattus norvegicus] [NCBI NR] gi\|109468897\|ref\|XP_230620.4\| PREDICTED: similar to serine palmitoyltransferase, long chain base subunit 2 [Rattus norvegicus] [NCBI NR] Tax_Id=10116 PREDICTED: similar to GD:SPTLC2L [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] serine palmitoyltransferase, long chain base subunit 3 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] similar to RIKEN cDNA C130053K05 gene; similar to dJ718P11.1.1 (novel class II aminotransferase similar to serine palmotyltransferase (isoform 1)) (predicted) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] PREDICTED: similar to serine palmitoyltransferase, long chain base subunit 2 [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Sptlc3 serine palmitoyltransferase, long chain base subunit 3 [rat-ipi-250309-contam.fasta] Similar to RIKEN cDNA C130053K05 gene; similar to dJ718P11.1.1 (Novel class II aminotransferase similar to serine palmotyltransferase (Isoform 1)) (Predicted) OS=Rattus norvegicus GN=Sptlc3 [011711_HMR.fasta] Similar to RIKEN cDNA C130053K05 gene; similar to dJ718P11.1.1 (Novel class II aminotransferase similar to serine palmotyltransferase (Isoform 1)) (Predicted) OS=Rattus norvegicus GN=Sptlc3 PE=3 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Sptlc3 OS=Rattus norvegicus GN=Sptlc3 PE=3 SV=1 [Aridor_1205.fasta]
Organism:	Rattus norvegicus
Length:	563 amino acids
Gene Ontology:
Cellular Component:	serine C-palmitoyltransferase complex [UNKNOWN] cellular_component [ND]
Biological Process:	biological_process [ND] sphingoid biosynthetic process [UNKNOWN] biosynthetic process [IEA]
Molecular Function:	pyridoxal phosphate binding [IEA] serine C-palmitoyltransferase activity [UNKNOWN] transaminase activity [IEA] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPRDSAVT NGTLRNPKTQ PGKRQSTDCV KNGISKEAQQ NRKAEEDDKL VFKPYPEPPL  60
   61 YVFVFTYMGY GIGMLFGYLR DFMRNWGIEK CNAAVEREEQ KDFVPLYQDF ENFYTRNLYM 120
  121 RIRDSWSHTV CSVPVPNFDI MEKVTDDYNW TFRHTGKVIK NVINMASYNY LGLASKYNES 180
  181 MEKVKDTIEK YGVGVASTRN EMGSLDIHNE LEDLMAKFLN VEAVMVFGMG FATNSTNIPI 240
  241 FVGKGCLILS DEFNHTSVIL GSRLSGAVIR PFKHNNIQNL EKLLREAIIR GQPRTGRAWK 300
  301 KILILVEGVY SMEGSIVNLP QIVALKKKYK AYLYMDEAHS IGCTGTMGQG IRELFGLAPE 360
  361 DIDIYMGTFT KSFAASGGYI AGKKEIVDYV RVQSHSATYA TSMSPVVAAQ IIRSLKIMMG 420
  421 YEGNFGGVQR IQQLRENIKY FRRRLIEMGF IIYGNDYSPV VPVLLYMPAK VSAFGRLLLK 480
  481 KKIAVVVVGF PATSLPEGRA RFSLSSAHTR EMLDTVLEVV DKIGDLLNVK YFPYKKSGRA 540
  541 VLYNKENFDN EASFEEKSSE PEA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.38

Protein Overview: gi|149023423, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: