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Protein Overview: gi|14043299

General Information:
Name(s) found: gi|14043299 [NCBI NR]
Description(s) found:
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  • gi|14043299|gb|AAH07644.1| YIF1B protein [Homo sapiens] [NCBI NR]
  • Similar to RIKEN cDNA 9430029K10 gene [hmr_yeast5_DM3-1_pombe.fasta]
  • Similar to RIKEN cDNA 9430029K10 gene [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • YIF1B protein [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • Tax_Id=9606 SIMILAR TO RIKEN CDNA 9430029K10 GENE [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
    • Organism: Homo sapiens
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPAGLAAAAA GTPRLPSKRR IPVSQPGMAD PHQLFDDTSS AQSRGYGAQR APGGLSYPAA  60
   61 SPTPHAAFLA DPVSNMAMAY GSSLAAQGKE LVDKNIDRFI PITKLKYYFA VDTMYVGRKL 120
  121 GLLFFPYLHQ DWEVQYQQDT PVAPRFDVNA PDLYIPAMAF ITYVLVAGLA LGTQDRFSPD 180
  181 LLGLQASSAL AWLTLEVLAI LLSLYLVTVN TDLTTIDLVA FLGYKYVGMI GGVLMGLLFG 240
  241 KIGYYLVLGW CCVAIFVFMI RTLRLKILAD AAAEGVPVRG ARNQLRMYLT MAVAAAQPML 300
  301 MYWLTFHLVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] FFAS03 0.976 Prion protein domain
    2 View Details [241..310] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.22514585792228 bayes_pls_golite062009
  • tubulin binding
    		•  1.96726329576357 bayes_pls_golite062009
  • protein binding
    		•  1.76565398252144 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.71860571490508 bayes_pls_golite062009
  • microtubule binding
    		•  1.7070745359784 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle