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Protein Overview: gi|56204926, gi|...

General Information:
Name(s) found: gi|56204926 [NCBI NR]
gi|27498544 [NCBI NR]
Description(s) found:
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  • gi|56204926|emb|CAI20472.1| novel protein similar to cytochrome c oxidase subunit VIa polypeptide 1 COX6A1 [Homo sapiens] [NCBI NR]
  • gi|27498544|ref|XP_208356.1| PREDICTED: similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor; cytochrome C oxidase subunit VIa homolog [Homo sapiens] [NCBI NR]
  • similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor; cytochrome C oxidase subunit VIa homolog [HMR_022704.fasta]
  • PREDICTED: similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor; cytochrome C oxidase subunit VIa homolog [071204_hmrz_cont.fasta]
  • PREDICTED: similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor; cytochrome C oxidase subunit VIa homolog [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 OTTHUMP00000016319 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • OTTHUMP00000016319 [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • Tax_Id=9606 OTTHUMP00000039687 [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • similar to cytochrome c oxidase subunit VIa polypeptide 1 precursor; cytochrome C oxidase subunit VIa homolog [Homo sapiens] [human-NCBI-042104-rand.fasta]
  • novel protein similar to cytochrome c oxidase subunit VIa polypeptide 1 COX6A1 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 PREDICTED: SIMILAR TO CYTOCHROME C OXIDASE SUBUNIT VIA POLYPEPTIDE 1 PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=COX6A1P2 Cytochrome c oxidase polypeptide VIa [human-ipi-250309-contam.fasta]
  • IPI:IPI00176681.1|TREMBL:Q5T8I0|ENSEMBL:ENSP00000404078|VEGA:OTTHUMP00000016319 Tax_Id=9606 Gene_Symbol=COX6A1P2;COX6A1 Cytochrome c oxidase polypeptide VIa [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=- OTTHUMP00000016319 ENSG00000164605 IPI00176681 [drosphohumanreversed.fasta]
  • Tax_Id=9606 Gene_Symbol=- OTTHUMP00000016319 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=COX6A1P2;COX6A1 Cytochrome c oxidase polypeptide VIa [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • Cytochrome c oxidase polypeptide VIa OS=Homo sapiens GN=RP3-405J24.3-001 [011711_HMR.fasta]
  • Cytochrome c oxidase polypeptide VIa OS=Homo sapiens GN=RP3-405J24.3-001 PE=3 SV=1 [UniProt_Human_05-17-2011_reversed.fasta]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Homo sapiens GN=RP3-405J24.3-001 PE=3 SV=1 [uniprot-human-120502.fasta]
  • IPI:IPI00176681.1|TREMBL:Q5T8I0|ENSEMBL:ENSP00000404078|VEGA:OTTHUMP00000016319 Tax_Id=9606 Gene_Symbol=COX6A1P2 Cytochrome c oxidase polypeptide VIa [ipi.HUMAN.20110912.fasta]
  • Cytochrome c oxidase subunit 6A, mitochondrial GN=COX6A1P2 [Doctor+uniprot-HUMAN-120911.fasta]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Homo sapiens GN=COX6A1P2 PE=3 SV=1 [102012_WuLab_Hsapiens.fasta]
  • Tax_Id=9606 Gene_Symbol=COX6A1P2 Cytochrome c oxidase subunit 6A, mitochondrial [human-ipi-270911-contam-BSA.fasta]
  • IPI:IPI00176681.1|TREMBL:Q5T8I0|ENSEMBL:ENSP00000404078|VEGA:OTTHUMP00000016319 Tax_Id=9606 Gene_Symbol=COX6A1P2 Cytochrome c oxidase subunit 6A, mitochondrial [ipi.HUMAN.fasta.20110927]
  • Cytochrome c oxidase subunit 6A, mitochondrial OS=Homo sapiens GN=COX6A1P2 PE=2 SV=1 [HUMAN.fasta.20131015]
    • Organism: Homo sapiens
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVGVFSVS RLLGRSRPQL GRPMSSGAHG EEGSARMWKT LTFFVALPGV AVSMLNVYLK  60
   61 SHHGEHERPE FIAYPHLRIR TKPFPWGDGN HTLFHNPHVN PLPTGYEDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 28.30103 Mitochondrial cytochrome c oxidase subunit VIa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  12.2317532545955 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  11.9189904362651 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  5.77104248101315 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  5.61858135414369 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.0189825255034 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.93709142475202 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.77145907631723 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.57436007698077 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.16699951799043 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.97113110639524 bayes_pls_golite062009
  • catalytic activity
    		•  0.448769452796145 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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