YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE40280

General Information:
Name(s) found: CE40280 [WormBase]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • WBGene00021604 status:Predicted UniProt:Q9N4W3 protein_id:CCD72654.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: chromosome [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    DNA topological change [IEALink to PubMed article]
    DNA metabolic process [IEALink to PubMed article]
    DNA unwinding involved in replication [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    DNA topoisomerase (ATP-hydrolyzing) activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRHRIRFKY NGADAIDMVF SKKKSEERKD WLSKWMREKK DRKQQGLAEE YLYDKDTRFV  60
   61 TFKDFVNREL VLFSNLDNER SIPCLVDGFK PGQRKVLFAC FKRSDKHGVK VAQLAGGVAD 120
  121 MSAYHHGEQS LMTTIVHLAQ DYGGKDSASA QYIFTQLSPV TRTLFPSHDD NVLRFLYEEN 180
  181 QRIEPEWYCP ISPMVLVNGA QGIDTGWRTN IPNYNPRELV KNIKRLIAGE PQKALAPWYK 240
  241 NFRGKIIQID PRRFACYGEV ALQSVICMSS MVLFDAAGCL RTSTSPEAIT QEFYDSRQEK 300
  301 YLQRKEYLLE VLQAQSKRLT NQARFILAKI NKEIVFENKK KVAIVDDLIK MGFDADPVKK 360
  361 WKEEQKLKLR ESGEMDEDDL ATVAVEDDEG VSSAAKAVET KLSGYEYLFG MTILDVSEEE 420
  421 TNKLINESEE KMTELRVLKK KTWQDLWHED LDNFLSELDK QEARERGDQD AMLENAVKKL 480
  481 AADAKSGRGS TKNVCPEVLP SKDGHRIEPR FDAATKAKYE KMTQPKRERV KKEPKKLAWQ 540
  541 ADCDDDVGVT SDEEVIRKPK PRAERRAAKK PAVEAPAKKA EPKKKKNNKL YDMSGGESAD 600
  601 DVGEKEGSDN GSVGSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] PSI-BLAST 100.0 TOPOISOMERASE RESIDUES 410-1202,
    2 View Details [91..616] PSI-BLAST 120.0 Structure of the full-length E. coli ParC subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle