| Protein: | CE40280 |
| Organism: | Caenorhabditis elegans |
| Length: | 616 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40280.
| Description | E-value | Query Range |
Subject Range |
|
|
569.0 | [0..52] | [612..3] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MDRHRIRFKY NGADAIDMVF SKKKSEERKD WLSKWMREKK DRKQQGLAEE YLYDKDTRFV 60
61 TFKDFVNREL VLFSNLDNER SIPCLVDGFK
|
| Detection Method: |  |
| Confidence: | 100.0 |
| Match: | 1bgwA |
| Description: | TOPOISOMERASE RESIDUES 410-1202, |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [91-616] |
1 11 21 31 41 51
| | | | | |
1 PGQRKVLFAC FKRSDKHGVK VAQLAGGVAD MSAYHHGEQS LMTTIVHLAQ DYGGKDSASA 60
61 QYIFTQLSPV TRTLFPSHDD NVLRFLYEEN QRIEPEWYCP ISPMVLVNGA QGIDTGWRTN 120
121 IPNYNPRELV KNIKRLIAGE PQKALAPWYK NFRGKIIQID PRRFACYGEV ALQSVICMSS 180
181 MVLFDAAGCL RTSTSPEAIT QEFYDSRQEK YLQRKEYLLE VLQAQSKRLT NQARFILAKI 240
241 NKEIVFENKK KVAIVDDLIK MGFDADPVKK WKEEQKLKLR ESGEMDEDDL ATVAVEDDEG 300
301 VSSAAKAVET KLSGYEYLFG MTILDVSEEE TNKLINESEE KMTELRVLKK KTWQDLWHED 360
361 LDNFLSELDK QEARERGDQD AMLENAVKKL AADAKSGRGS TKNVCPEVLP SKDGHRIEPR 420
421 FDAATKAKYE KMTQPKRERV KKEPKKLAWQ ADCDDDVGVT SDEEVIRKPK PRAERRAAKK 480
481 PAVEAPAKKA EPKKKKNNKL YDMSGGESAD DVGEKEGSDN GSVGSG
|
| Detection Method: | |
| Confidence: | 120.0 |
| Match: | 1zvuA |
| Description: | Structure of the full-length E. coli ParC subunit |
Matching Structure (courtesy of the PDB): |
|
