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Protein Overview: gi|4758496, gi|3...

General Information:
Name(s) found: gi|93141020 [NCBI NR]
gi|4758496 [NCBI NR]
gi|3341992 [NCBI NR]
gi|119582623 [NCBI NR]
Description(s) found:
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  • gi|93141020|ref|NP_001035248.1| H2A histone family, member Y isoform 2 [Homo sapiens] [NCBI NR]
  • gi|4758496|ref|NP_004884.1| H2A histone family, member Y isoform 2 [Homo sapiens] [NCBI NR]
  • gi|3341992|gb|AAC39908.1| histone macroH2A1.2 [Homo sapiens] [NCBI NR]
  • gi|119582623|gb|EAW62219.1| H2A histone family, member Y, isoform CRA_b [Homo sapiens] [NCBI NR]
  • H2A histone family, member Y isoform 2 [hmr_yeast5_DM3-1_pombe.fasta]
  • H2A histone family, member Y isoform 2; histone macroH2A1.2; histone macroH2A1.1 [HMR_022704.fasta]
  • H2A histone family, member Y isoform 2 [Homo sapiens]gi|3341992|gb|AAC39908.1| histone macroH2A1.2 [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 H2A histone family, member Y isoform 2 [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_004893) H2A histone family, member Y, isoform 2; histone macroH2A1.2; histone macroH2A1.1 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • H2A histone family, member Y isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • Tax_Id=9606 H2A histone family, member Y isoform 2 [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • H2A histone family, member Y isoform 2; histone macroH2A1.2; histone macroH2A1.1 [Homo sapiens] [HumanGallus06162005.fasta]
  • H2A histone family, member Y, isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • histone macroH2A1.2 [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 H2A HISTONE FAMILY, MEMBER Y ISOFORM 2 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=H2AFY H2A histone family, member Y isoform 2 [human-ipi-250309-contam.fasta]
  • IPI:IPI00059366.4|ENSEMBL:ENSP00000302572;ENSP00000378410|REFSEQ:NP_001035248;NP_004884|H-INV:HIT000001743|VEGA:OTTHUMP00000159414 Tax_Id=9606 Gene_Symbol=H2AFY H2A histone family, member Y isoform 2 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=H2AFY;PITX1 H2A histone family, member Y isoform 2 [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=H2AFY Isoform 3 of Core histone macro-H2A.1 [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • core histone macro-H2A.1 isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Isoform 3 of Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY [011711_HMR.fasta]
  • IPI:IPI00059366.4|SWISS-PROT:O75367-3|ENSEMBL:ENSP00000302572;ENSP00000378410|REFSEQ:NP_001035248;NP_004884|H-INV:HIT000001743|VEGA:OTTHUMP00000159414 Tax_Id=9606 Gene_Symbol=H2AFY Isoform 3 of Core histone macro-H2A.1 [ipi.HUMAN.fasta.20100406]
  • GeneSymbol=H2AFY Synonyms=H2A.y|H2A/y|H2AF12M|H2AFJ|MACROH2A1.1|mH2A1|macroH2A1.2 core histone macro-H2A.1 isoform 2 [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00059366.4|SWISS-PROT:O75367-3|ENSEMBL:ENSP00000302572|REFSEQ:NP_001035248;NP_004884|H-INV:HIT000001743|VEGA:OTTHUMP00000223175 Tax_Id=9606 Gene_Symbol=H2AFY Isoform 3 of Core histone macro-H2A.1 [ipi.HUMAN.20110912.fasta]
  • Isoform 3 of Core histone macro-H2A.1 GN=H2AFY [Doctor+uniprot-HUMAN-120911.fasta]
  • Isoform of O75367, Isoform 3 of Core histone macro-H2A.1 OS=Homo sapiens GN=H2AFY [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 371 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRGGKKKS TKTSRSAKAG VIFPVGRMLR YIKKGHPKYR IGVGAPVYMA AVLEYLTAEI  60
   61 LELAGNAARD NKKGRVTPRH ILLAVANDEE LNQLLKGVTI ASGGVLPNIH PELLAKKRGS 120
  121 KGKLEAIITP PPAKKAKSPS QKKPVSKKAG GKKGARKSKK QGEVSKAASA DSTTEGTPAD 180
  181 GFTVLSTKSL FLGQKLNLIH SEISNLAGFE VEAIINPTNA DIDLKDDLGN TLEKKGGKEF 240
  241 VEAVLELRKK NGPLEVAGAA VSAGHGLPAK FVIHCNSPVW GADKCEELLE KTVKNCLALA 300
  301 DDKKLKSIAF PSIGSGRNGF PKQTAAQLIL KAISSYFVST MSSSIKTVYF VLFDSESIGI 360
  361 YVQEMAKLDA N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 38.0 Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
    2 View Details [129..371] PSI-BLAST 56.522879 Crystal structure of the macro-domain of human core histone variant macroH2A1.2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle