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Protein Overview: gi|113611888, gi...

General Information:
Name(s) found: gi|115473507 [NCBI NR]
gi|113611888 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|115473507|ref|NP_001060352.1| Os07g0628700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113611888|dbj|BAF22266.1| Os07g0628700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 677 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCSGNMLR AVHVLAIAAA VLTLAPLAAS YPWQACNGSS NYTANSAFQR NLGVLAAALP  60
   61 GNASTSPDLL ANATVGGAPD TVYALAFCPP IDNQNASGCR ACVASAFADA RSLCPNNRGA 120
  121 HIIYDGCVLT FSGRDFLGAA TNPADMERKL RNTENVTVSD VGEFNGAIYE VLNATADYTA 180
  181 AAARRFGTGE ISFDPTYPVI YSMAWCTPDM APGRCRACLA DTIAQMHAYF NPNAQGARLV 240
  241 GVRCAARYEI YPFYTGRGMV QVPVSRPPAV PGTPGKKSKT GKILAIVLPI VAALLASAMI 300
  301 CFCCWRRRTK ATKLSLSYSS RSEDIQNIES LIMDLPTLRI ATDNFAENNK LGEGGFGEVY 360
  361 KGSFPGGQTI AVKRLSQSSG QGIGELKNEL VLIAKLQHKN LVRLVGVCLE QEEKLLVYEY 420
  421 MPNKSLDTFL FDPEKRKQID WAKRFMIIKG ITGGLQYLHE DSQLKIIHRD LKASNVLLDA 480
  481 NMNPKISDFG LARLFGDDQS QETTNRVVGT YGYMAPEYAL RGQYSIKSDV YSFGVLLLEI 540
  541 ITGRKNSDSY NSEQAVDLLS LVWEHWAMKT ITEMVDPYLR SDSSSLDEIL RCIHVGLVCV 600
  601 QEDPMDRPTL SMINIMLDGN TVSAKAPSRP AFFTEMLGNI NIGSSMYSQP YPVTDSTAKH 660
  661 STAMSLNDVT VTEPEPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 3.69897 Polygalacturonase inhibiting protein PGIP
    2 View Details [196..270] Pfam 8.49485 No description for PF01657.8 was found. No confident structure predictions are available.
    3 View Details [271..677] PSI-BLAST 70.0 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein kinase activity
    		•  1.06460841974796 bayes_pls_golite062009
  • binding
    		•  0.971663701565926 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.923420217755892 bayes_pls_golite062009
  • kinase activity
    		•  0.854299703887097 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.742478787268154 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • protein binding
    		•  0.390585548581888 bayes_pls_golite062009
  • receptor activity
    		•  0.022985012526249 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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