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Protein Overview: gi|115472061, gi...

General Information:
Name(s) found: gi|115472061 [NCBI NR]
gi|113611165 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|115472061|ref|NP_001059629.1| Os07g0477500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113611165|dbj|BAF21543.1| Os07g0477500 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 794 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGAPKRSHE EGSHSTPAKR PLDDSSLYSS PSGKIIQPGS SDFHGSFEHD GRFAKVQRIE  60
   61 PRDDKRPSLA HRMPIGPSNF VDHSISSDGR LESKQNKDPW DTKVDVREAK ADTRDVYSDP 120
  121 RVEFPSNKVE TDVKTDNRAD DNDIRADRRI HADYKGDAKL DKDGHPTAIS NIAWKDNKEH 180
  181 RGKRNIEQPS DNADWRFPRP GLQGTDESSK GPVPADERSK DAHESTGENK TEPKTEDKFR 240
  241 DKDRKKKDEK HRDFGTRDND RNDRRIGIQL GGNSVERREN QREDRDAEKW DRERKDSQKD 300
  301 KEGNDREKDS AKESSVATEK ENAILEKTAS DGAVKSAEHE NKTVEQKTLK DDAWKSHDRD 360
  361 PKDKKREKDM DAGERHDQRS KYNDKESDDT CPEGDIEKDK EALGSVQRKR MARSRGGSQA 420
  421 SQREPRFRSR MRDGEGSQGK SEASAIVYKA GECMQELLKS WKEFEATPEA KSAESVQNGP 480
  481 TLEIRIPAEF VTSTNRQVKG AQLWGTDIYT NDSDLVAVLM HTGYCSPTSS PPPSAIQELR 540
  541 ATVRVLPPQD SYTSTLRNNV RSRAWGAGIG CSFRIERCCI VKKGGGTIDL EPRLSHTSAV 600
  601 EPTLAPVAVE RTMTTRAAAS NALRQQRFVR EVTIQYNLCN EPWLKYSISI VADKGLKKSL 660
  661 YTSARLKKGE VIYLETHYNR YELCFSGEKA RLVGSSSNAA DAETEKHQNS SHHHSQNGDR 720
  721 ASSEHELRDL FRWSRCKKAM PESSMRSIGI PLPADQLEVL QDNLEWEDVQ WSQTGVWVAG 780
  781 KEYPLARVHF LSSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 11.09691 Heavy meromyosin subfragment
    2 View Details [383..511] PSI-BLAST 4.154902 Tropomyosin
    3 View Details [512..592] FFAS03 2.23 Cochlin
    4 View Details [593..794] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle