| Protein: | gi|115472061, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 794 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115472061, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..113] | [794..56] |
|
Region A: Residues: [1-382] |
1 11 21 31 41 51
| | | | | |
1 MSGAPKRSHE EGSHSTPAKR PLDDSSLYSS PSGKIIQPGS SDFHGSFEHD GRFAKVQRIE 60
61 PRDDKRPSLA HRMPIGPSNF VDHSISSDGR LESKQNKDPW DTKVDVREAK ADTRDVYSDP 120
121 RVEFPSNKVE TDVKTDNRAD DNDIRADRRI HADYKGDAKL DKDGHPTAIS NIAWKDNKEH 180
181 RGKRNIEQPS DNADWRFPRP GLQGTDESSK GPVPADERSK DAHESTGENK TEPKTEDKFR 240
241 DKDRKKKDEK HRDFGTRDND RNDRRIGIQL GGNSVERREN QREDRDAEKW DRERKDSQKD 300
301 KEGNDREKDS AKESSVATEK ENAILEKTAS DGAVKSAEHE NKTVEQKTLK DDAWKSHDRD 360
361 PKDKKREKDM DAGERHDQRS KY
|
| Detection Method: |  |
| Confidence: | 11.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-511] |
1 11 21 31 41 51
| | | | | |
1 NDKESDDTCP EGDIEKDKEA LGSVQRKRMA RSRGGSQASQ REPRFRSRMR DGEGSQGKSE 60
61 ASAIVYKAGE CMQELLKSWK EFEATPEAKS AESVQNGPTL EIRIPAEFVT STNRQVKGAQ 120
121 LWGTDIYTN
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [512-592] |
1 11 21 31 41 51
| | | | | |
1 DSDLVAVLMH TGYCSPTSSP PPSAIQELRA TVRVLPPQDS YTSTLRNNVR SRAWGAGIGC 60
61 SFRIERCCIV KKGGGTIDLE P
|
| Detection Method: | |
| Confidence: | 2.23 |
| Match: | 1jbiA |
| Description: | Cochlin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [593-794] |
1 11 21 31 41 51
| | | | | |
1 RLSHTSAVEP TLAPVAVERT MTTRAAASNA LRQQRFVREV TIQYNLCNEP WLKYSISIVA 60
61 DKGLKKSLYT SARLKKGEVI YLETHYNRYE LCFSGEKARL VGSSSNAADA ETEKHQNSSH 120
121 HHSQNGDRAS SEHELRDLFR WSRCKKAMPE SSMRSIGIPL PADQLEVLQD NLEWEDVQWS 180
181 QTGVWVAGKE YPLARVHFLS SN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
